HTTP 200 OK
Allow: GET, POST, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept
{
"count": 95,
"next": "https://cinder.proteo.info/api/source_files/?format=api&ordering=-created_at&page=3",
"previous": "https://cinder.proteo.info/api/source_files/?format=api&ordering=-created_at",
"results": [
{
"id": 2117,
"name": "s72_prostate_2.raw",
"description": "s72_prostate_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:49.564594Z",
"updated_at": "2025-01-29T20:55:49.564607Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65244,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 72",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.573945Z",
"updated_at": "2025-01-29T20:55:49.573960Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65245,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.582360Z",
"updated_at": "2025-01-29T20:55:49.582376Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65246,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "prostate",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.590659Z",
"updated_at": "2025-01-29T20:55:49.590675Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65247,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.598842Z",
"updated_at": "2025-01-29T20:55:49.598856Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65248,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.607232Z",
"updated_at": "2025-01-29T20:55:49.607247Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65249,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.615667Z",
"updated_at": "2025-01-29T20:55:49.615681Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65250,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.624021Z",
"updated_at": "2025-01-29T20:55:49.624036Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65251,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.632378Z",
"updated_at": "2025-01-29T20:55:49.632394Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65252,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.640761Z",
"updated_at": "2025-01-29T20:55:49.640778Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65253,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.648984Z",
"updated_at": "2025-01-29T20:55:49.648998Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65254,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.657357Z",
"updated_at": "2025-01-29T20:55:49.657371Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65255,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.665651Z",
"updated_at": "2025-01-29T20:55:49.665665Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65256,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 72",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.673997Z",
"updated_at": "2025-01-29T20:55:49.674010Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65257,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.682318Z",
"updated_at": "2025-01-29T20:55:49.682332Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65258,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s72_prostate_2.raw",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.690654Z",
"updated_at": "2025-01-29T20:55:49.690668Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65259,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s72_prostate_2.raw",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.699019Z",
"updated_at": "2025-01-29T20:55:49.699034Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65260,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.707250Z",
"updated_at": "2025-01-29T20:55:49.707265Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65261,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.715654Z",
"updated_at": "2025-01-29T20:55:49.715667Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65262,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.724038Z",
"updated_at": "2025-01-29T20:55:49.724051Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65263,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.732346Z",
"updated_at": "2025-01-29T20:55:49.732361Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65264,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.740720Z",
"updated_at": "2025-01-29T20:55:49.740734Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65265,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.748990Z",
"updated_at": "2025-01-29T20:55:49.749004Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65266,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.757376Z",
"updated_at": "2025-01-29T20:55:49.757391Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65267,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.765697Z",
"updated_at": "2025-01-29T20:55:49.765711Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65268,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.774038Z",
"updated_at": "2025-01-29T20:55:49.774051Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65269,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.782275Z",
"updated_at": "2025-01-29T20:55:49.782292Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65270,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "prostate",
"analysis_group": 2,
"source_file": 2117,
"created_at": "2025-01-29T20:55:49.790675Z",
"updated_at": "2025-01-29T20:55:49.790689Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2116,
"name": "s71_prostate_1.raw",
"description": "s71_prostate_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:49.315444Z",
"updated_at": "2025-01-29T20:55:49.315457Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65217,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 71",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.323883Z",
"updated_at": "2025-01-29T20:55:49.323898Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65218,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.332216Z",
"updated_at": "2025-01-29T20:55:49.332227Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65219,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "prostate",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.340570Z",
"updated_at": "2025-01-29T20:55:49.340585Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65220,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.348929Z",
"updated_at": "2025-01-29T20:55:49.348944Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65221,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.357122Z",
"updated_at": "2025-01-29T20:55:49.357136Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65222,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.365538Z",
"updated_at": "2025-01-29T20:55:49.365551Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65223,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.373888Z",
"updated_at": "2025-01-29T20:55:49.373902Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65224,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.382222Z",
"updated_at": "2025-01-29T20:55:49.382235Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65225,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.390547Z",
"updated_at": "2025-01-29T20:55:49.390559Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65226,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.399169Z",
"updated_at": "2025-01-29T20:55:49.399187Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65227,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.407208Z",
"updated_at": "2025-01-29T20:55:49.407220Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65228,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.415557Z",
"updated_at": "2025-01-29T20:55:49.415570Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65229,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 71",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.423882Z",
"updated_at": "2025-01-29T20:55:49.423896Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65230,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.432230Z",
"updated_at": "2025-01-29T20:55:49.432243Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65231,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s71_prostate_1.raw",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.440633Z",
"updated_at": "2025-01-29T20:55:49.440646Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65232,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s71_prostate_1.raw",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.448939Z",
"updated_at": "2025-01-29T20:55:49.448952Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65233,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.457264Z",
"updated_at": "2025-01-29T20:55:49.457277Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65234,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.466219Z",
"updated_at": "2025-01-29T20:55:49.466256Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65235,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.473928Z",
"updated_at": "2025-01-29T20:55:49.473942Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65236,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.483115Z",
"updated_at": "2025-01-29T20:55:49.483156Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65237,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.490787Z",
"updated_at": "2025-01-29T20:55:49.490807Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65238,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.499073Z",
"updated_at": "2025-01-29T20:55:49.499091Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65239,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.507187Z",
"updated_at": "2025-01-29T20:55:49.507200Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65240,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.515585Z",
"updated_at": "2025-01-29T20:55:49.515598Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65241,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.523935Z",
"updated_at": "2025-01-29T20:55:49.523948Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65242,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.532292Z",
"updated_at": "2025-01-29T20:55:49.532306Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65243,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "prostate",
"analysis_group": 2,
"source_file": 2116,
"created_at": "2025-01-29T20:55:49.540671Z",
"updated_at": "2025-01-29T20:55:49.540686Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2115,
"name": "s70_skeletalmuscle_2.raw",
"description": "s70_skeletalmuscle_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:49.018357Z",
"updated_at": "2025-01-29T20:55:49.018373Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65190,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 70",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.028973Z",
"updated_at": "2025-01-29T20:55:49.028993Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65191,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.037084Z",
"updated_at": "2025-01-29T20:55:49.037097Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65192,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "skeletal muscle",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.045446Z",
"updated_at": "2025-01-29T20:55:49.045459Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65193,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.053733Z",
"updated_at": "2025-01-29T20:55:49.053747Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65194,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.062082Z",
"updated_at": "2025-01-29T20:55:49.062094Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65195,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.070440Z",
"updated_at": "2025-01-29T20:55:49.070453Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65196,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.078784Z",
"updated_at": "2025-01-29T20:55:49.078797Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65197,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.087110Z",
"updated_at": "2025-01-29T20:55:49.087124Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65198,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.095433Z",
"updated_at": "2025-01-29T20:55:49.095447Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65199,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.103946Z",
"updated_at": "2025-01-29T20:55:49.103964Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65200,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.112119Z",
"updated_at": "2025-01-29T20:55:49.112132Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65201,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.120697Z",
"updated_at": "2025-01-29T20:55:49.120727Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65202,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 70",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.128798Z",
"updated_at": "2025-01-29T20:55:49.128811Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65203,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.137142Z",
"updated_at": "2025-01-29T20:55:49.137156Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65204,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s70_skeletalmuscle_2.raw",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.145475Z",
"updated_at": "2025-01-29T20:55:49.145488Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65205,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s70_skeletalmuscle_2.raw",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.153819Z",
"updated_at": "2025-01-29T20:55:49.153832Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65206,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.162144Z",
"updated_at": "2025-01-29T20:55:49.162158Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65207,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.170522Z",
"updated_at": "2025-01-29T20:55:49.170539Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65208,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.178816Z",
"updated_at": "2025-01-29T20:55:49.178828Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65209,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.187122Z",
"updated_at": "2025-01-29T20:55:49.187135Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65210,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.195479Z",
"updated_at": "2025-01-29T20:55:49.195494Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65211,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.203803Z",
"updated_at": "2025-01-29T20:55:49.203815Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65212,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.212148Z",
"updated_at": "2025-01-29T20:55:49.212161Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65213,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.220512Z",
"updated_at": "2025-01-29T20:55:49.220526Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65214,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.228856Z",
"updated_at": "2025-01-29T20:55:49.228872Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65215,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.237147Z",
"updated_at": "2025-01-29T20:55:49.237159Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65216,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "skeletal muscle",
"analysis_group": 2,
"source_file": 2115,
"created_at": "2025-01-29T20:55:49.246243Z",
"updated_at": "2025-01-29T20:55:49.246285Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2114,
"name": "s69_skeletalmuscle_1.raw",
"description": "s69_skeletalmuscle_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:48.763412Z",
"updated_at": "2025-01-29T20:55:48.763428Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65163,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 69",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.773749Z",
"updated_at": "2025-01-29T20:55:48.773764Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65164,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.782040Z",
"updated_at": "2025-01-29T20:55:48.782053Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65165,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "skeletal muscle",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.791018Z",
"updated_at": "2025-01-29T20:55:48.791055Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65166,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.798701Z",
"updated_at": "2025-01-29T20:55:48.798715Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65167,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.807012Z",
"updated_at": "2025-01-29T20:55:48.807025Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65168,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.815358Z",
"updated_at": "2025-01-29T20:55:48.815371Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65169,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.823748Z",
"updated_at": "2025-01-29T20:55:48.823761Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65170,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.832082Z",
"updated_at": "2025-01-29T20:55:48.832096Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65171,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.840486Z",
"updated_at": "2025-01-29T20:55:48.840498Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65172,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.849407Z",
"updated_at": "2025-01-29T20:55:48.849443Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65173,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.856998Z",
"updated_at": "2025-01-29T20:55:48.857011Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65174,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.865411Z",
"updated_at": "2025-01-29T20:55:48.865425Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65175,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 69",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.873759Z",
"updated_at": "2025-01-29T20:55:48.873774Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65176,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.881968Z",
"updated_at": "2025-01-29T20:55:48.881980Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65177,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s69_skeletalmuscle_1.raw",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.890409Z",
"updated_at": "2025-01-29T20:55:48.890423Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65178,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s69_skeletalmuscle_1.raw",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.898720Z",
"updated_at": "2025-01-29T20:55:48.898732Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65179,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.907086Z",
"updated_at": "2025-01-29T20:55:48.907099Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65180,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.915403Z",
"updated_at": "2025-01-29T20:55:48.915417Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65181,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.923738Z",
"updated_at": "2025-01-29T20:55:48.923752Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65182,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.931950Z",
"updated_at": "2025-01-29T20:55:48.931963Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65183,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.940459Z",
"updated_at": "2025-01-29T20:55:48.940474Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65184,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.948717Z",
"updated_at": "2025-01-29T20:55:48.948730Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65185,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.957098Z",
"updated_at": "2025-01-29T20:55:48.957111Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65186,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.965462Z",
"updated_at": "2025-01-29T20:55:48.965476Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65187,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.973781Z",
"updated_at": "2025-01-29T20:55:48.973794Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65188,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.982126Z",
"updated_at": "2025-01-29T20:55:48.982140Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65189,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "skeletal muscle",
"analysis_group": 2,
"source_file": 2114,
"created_at": "2025-01-29T20:55:48.990445Z",
"updated_at": "2025-01-29T20:55:48.990459Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2113,
"name": "s68_salivarygland_2.raw",
"description": "s68_salivarygland_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:48.512952Z",
"updated_at": "2025-01-29T20:55:48.512965Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65136,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 68",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.520187Z",
"updated_at": "2025-01-29T20:55:48.520201Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65137,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.528633Z",
"updated_at": "2025-01-29T20:55:48.528646Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65138,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "salivary gland",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.536961Z",
"updated_at": "2025-01-29T20:55:48.536974Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65139,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.545272Z",
"updated_at": "2025-01-29T20:55:48.545286Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65140,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.553605Z",
"updated_at": "2025-01-29T20:55:48.553619Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65141,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.561856Z",
"updated_at": "2025-01-29T20:55:48.561869Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65142,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.570278Z",
"updated_at": "2025-01-29T20:55:48.570292Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65143,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.578766Z",
"updated_at": "2025-01-29T20:55:48.578785Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65144,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.587141Z",
"updated_at": "2025-01-29T20:55:48.587159Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65145,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.595266Z",
"updated_at": "2025-01-29T20:55:48.595280Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65146,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.603766Z",
"updated_at": "2025-01-29T20:55:48.603785Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65147,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.611875Z",
"updated_at": "2025-01-29T20:55:48.611889Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65148,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 68",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.620273Z",
"updated_at": "2025-01-29T20:55:48.620286Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65149,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.628626Z",
"updated_at": "2025-01-29T20:55:48.628641Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65150,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s68_salivarygland_2.raw",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.636948Z",
"updated_at": "2025-01-29T20:55:48.636962Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65151,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s68_salivarygland_2.raw",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.645279Z",
"updated_at": "2025-01-29T20:55:48.645292Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65152,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.653578Z",
"updated_at": "2025-01-29T20:55:48.653592Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65153,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.661941Z",
"updated_at": "2025-01-29T20:55:48.661955Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65154,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.670315Z",
"updated_at": "2025-01-29T20:55:48.670329Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65155,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.678853Z",
"updated_at": "2025-01-29T20:55:48.678872Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65156,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.686987Z",
"updated_at": "2025-01-29T20:55:48.687001Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65157,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.695324Z",
"updated_at": "2025-01-29T20:55:48.695339Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65158,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.703666Z",
"updated_at": "2025-01-29T20:55:48.703680Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65159,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.711985Z",
"updated_at": "2025-01-29T20:55:48.711998Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65160,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.720411Z",
"updated_at": "2025-01-29T20:55:48.720431Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65161,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.728677Z",
"updated_at": "2025-01-29T20:55:48.728692Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65162,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "salivary gland",
"analysis_group": 2,
"source_file": 2113,
"created_at": "2025-01-29T20:55:48.736959Z",
"updated_at": "2025-01-29T20:55:48.736972Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2112,
"name": "s67_salivarygland_1.raw",
"description": "s67_salivarygland_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:48.127433Z",
"updated_at": "2025-01-29T20:55:48.127446Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65109,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 67",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.136921Z",
"updated_at": "2025-01-29T20:55:48.136936Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65110,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.145201Z",
"updated_at": "2025-01-29T20:55:48.145215Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65111,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "salivary gland",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.153501Z",
"updated_at": "2025-01-29T20:55:48.153515Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65112,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.161884Z",
"updated_at": "2025-01-29T20:55:48.161897Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65113,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.170240Z",
"updated_at": "2025-01-29T20:55:48.170254Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65114,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.244661Z",
"updated_at": "2025-01-29T20:55:48.244705Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65115,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.257707Z",
"updated_at": "2025-01-29T20:55:48.257750Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65116,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.331143Z",
"updated_at": "2025-01-29T20:55:48.331184Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65117,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.340244Z",
"updated_at": "2025-01-29T20:55:48.340258Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65118,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.348547Z",
"updated_at": "2025-01-29T20:55:48.348560Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65119,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.356906Z",
"updated_at": "2025-01-29T20:55:48.356920Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65120,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.365229Z",
"updated_at": "2025-01-29T20:55:48.365242Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65121,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 67",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.373583Z",
"updated_at": "2025-01-29T20:55:48.373596Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65122,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.381953Z",
"updated_at": "2025-01-29T20:55:48.381966Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65123,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s67_salivarygland_1.raw",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.390279Z",
"updated_at": "2025-01-29T20:55:48.390292Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65124,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s67_salivarygland_1.raw",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.398605Z",
"updated_at": "2025-01-29T20:55:48.398618Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65125,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.406956Z",
"updated_at": "2025-01-29T20:55:48.406969Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65126,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.415226Z",
"updated_at": "2025-01-29T20:55:48.415239Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65127,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.423553Z",
"updated_at": "2025-01-29T20:55:48.423566Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65128,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.431857Z",
"updated_at": "2025-01-29T20:55:48.431870Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65129,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.440193Z",
"updated_at": "2025-01-29T20:55:48.440206Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65130,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.448596Z",
"updated_at": "2025-01-29T20:55:48.448610Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65131,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.456916Z",
"updated_at": "2025-01-29T20:55:48.456930Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65132,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.465201Z",
"updated_at": "2025-01-29T20:55:48.465214Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65133,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.473564Z",
"updated_at": "2025-01-29T20:55:48.473578Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65134,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.481913Z",
"updated_at": "2025-01-29T20:55:48.481927Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65135,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "salivary gland",
"analysis_group": 2,
"source_file": 2112,
"created_at": "2025-01-29T20:55:48.490241Z",
"updated_at": "2025-01-29T20:55:48.490255Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2111,
"name": "s66_lymphnode_2.raw",
"description": "s66_lymphnode_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:47.878195Z",
"updated_at": "2025-01-29T20:55:47.878213Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65082,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 66",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.886995Z",
"updated_at": "2025-01-29T20:55:47.887014Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65083,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.895128Z",
"updated_at": "2025-01-29T20:55:47.895141Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65084,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "lymph node",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.903510Z",
"updated_at": "2025-01-29T20:55:47.903524Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65085,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.911840Z",
"updated_at": "2025-01-29T20:55:47.911854Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65086,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.920073Z",
"updated_at": "2025-01-29T20:55:47.920087Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65087,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.928525Z",
"updated_at": "2025-01-29T20:55:47.928539Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65088,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.936832Z",
"updated_at": "2025-01-29T20:55:47.936846Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65089,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.945071Z",
"updated_at": "2025-01-29T20:55:47.945087Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65090,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.953492Z",
"updated_at": "2025-01-29T20:55:47.953504Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65091,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.961890Z",
"updated_at": "2025-01-29T20:55:47.961903Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65092,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.970213Z",
"updated_at": "2025-01-29T20:55:47.970227Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65093,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.978550Z",
"updated_at": "2025-01-29T20:55:47.978564Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65094,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 66",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.986877Z",
"updated_at": "2025-01-29T20:55:47.986891Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65095,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:47.995194Z",
"updated_at": "2025-01-29T20:55:47.995208Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65096,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s66_lymphnode_2.raw",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.003594Z",
"updated_at": "2025-01-29T20:55:48.003609Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65097,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s66_lymphnode_2.raw",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.011871Z",
"updated_at": "2025-01-29T20:55:48.011884Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65098,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.020211Z",
"updated_at": "2025-01-29T20:55:48.020224Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65099,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.028586Z",
"updated_at": "2025-01-29T20:55:48.028601Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65100,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.036883Z",
"updated_at": "2025-01-29T20:55:48.036896Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65101,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.045200Z",
"updated_at": "2025-01-29T20:55:48.045214Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65102,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.053534Z",
"updated_at": "2025-01-29T20:55:48.053547Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65103,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.061892Z",
"updated_at": "2025-01-29T20:55:48.061905Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65104,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.070211Z",
"updated_at": "2025-01-29T20:55:48.070225Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65105,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.078552Z",
"updated_at": "2025-01-29T20:55:48.078566Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65106,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.086882Z",
"updated_at": "2025-01-29T20:55:48.086897Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65107,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.095152Z",
"updated_at": "2025-01-29T20:55:48.095165Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65108,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "lymph node",
"analysis_group": 2,
"source_file": 2111,
"created_at": "2025-01-29T20:55:48.103818Z",
"updated_at": "2025-01-29T20:55:48.103838Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2110,
"name": "s65_lymphnode_1.raw",
"description": "s65_lymphnode_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:47.533852Z",
"updated_at": "2025-01-29T20:55:47.533884Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65055,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 65",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.603809Z",
"updated_at": "2025-01-29T20:55:47.603848Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65056,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.627960Z",
"updated_at": "2025-01-29T20:55:47.627990Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65057,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "lymph node",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.645966Z",
"updated_at": "2025-01-29T20:55:47.646007Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65058,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.657040Z",
"updated_at": "2025-01-29T20:55:47.657062Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65059,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.665338Z",
"updated_at": "2025-01-29T20:55:47.665358Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65060,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.673448Z",
"updated_at": "2025-01-29T20:55:47.673461Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65061,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.681804Z",
"updated_at": "2025-01-29T20:55:47.681817Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65062,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.690128Z",
"updated_at": "2025-01-29T20:55:47.690141Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65063,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.698466Z",
"updated_at": "2025-01-29T20:55:47.698481Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65064,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.706793Z",
"updated_at": "2025-01-29T20:55:47.706807Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65065,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.715117Z",
"updated_at": "2025-01-29T20:55:47.715130Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65066,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.723464Z",
"updated_at": "2025-01-29T20:55:47.723478Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65067,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 65",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.731794Z",
"updated_at": "2025-01-29T20:55:47.731808Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65068,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.740131Z",
"updated_at": "2025-01-29T20:55:47.740145Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65069,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s65_lymphnode_1.raw",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.748503Z",
"updated_at": "2025-01-29T20:55:47.748518Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65070,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s65_lymphnode_1.raw",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.756796Z",
"updated_at": "2025-01-29T20:55:47.756809Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65071,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.765089Z",
"updated_at": "2025-01-29T20:55:47.765103Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65072,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.773448Z",
"updated_at": "2025-01-29T20:55:47.773461Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65073,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.781800Z",
"updated_at": "2025-01-29T20:55:47.781813Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65074,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.790129Z",
"updated_at": "2025-01-29T20:55:47.790142Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65075,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.798378Z",
"updated_at": "2025-01-29T20:55:47.798391Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65076,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.807057Z",
"updated_at": "2025-01-29T20:55:47.807076Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65077,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.815162Z",
"updated_at": "2025-01-29T20:55:47.815175Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65078,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.823507Z",
"updated_at": "2025-01-29T20:55:47.823520Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65079,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.831777Z",
"updated_at": "2025-01-29T20:55:47.831790Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65080,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.840177Z",
"updated_at": "2025-01-29T20:55:47.840190Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65081,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "lymph node",
"analysis_group": 2,
"source_file": 2110,
"created_at": "2025-01-29T20:55:47.848546Z",
"updated_at": "2025-01-29T20:55:47.848561Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2109,
"name": "s64_adiposetissue_2.raw",
"description": "s64_adiposetissue_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:47.189336Z",
"updated_at": "2025-01-29T20:55:47.189351Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65028,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 64",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.240240Z",
"updated_at": "2025-01-29T20:55:47.240259Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65029,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.248341Z",
"updated_at": "2025-01-29T20:55:47.248354Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65030,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "adipose",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.256704Z",
"updated_at": "2025-01-29T20:55:47.256717Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65031,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.265023Z",
"updated_at": "2025-01-29T20:55:47.265037Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65032,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.281691Z",
"updated_at": "2025-01-29T20:55:47.281705Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65033,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.290052Z",
"updated_at": "2025-01-29T20:55:47.290066Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65034,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.311711Z",
"updated_at": "2025-01-29T20:55:47.311726Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65035,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.320028Z",
"updated_at": "2025-01-29T20:55:47.320041Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65036,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.328351Z",
"updated_at": "2025-01-29T20:55:47.328378Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65037,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.336680Z",
"updated_at": "2025-01-29T20:55:47.336694Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65038,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.344988Z",
"updated_at": "2025-01-29T20:55:47.345002Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65039,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.353355Z",
"updated_at": "2025-01-29T20:55:47.353368Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65040,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 64",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.361665Z",
"updated_at": "2025-01-29T20:55:47.361677Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65041,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.370026Z",
"updated_at": "2025-01-29T20:55:47.370039Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65042,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s64_adiposetissue_2.raw",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.378364Z",
"updated_at": "2025-01-29T20:55:47.378377Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65043,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s64_adiposetissue_2.raw",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.386691Z",
"updated_at": "2025-01-29T20:55:47.386705Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65044,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.395063Z",
"updated_at": "2025-01-29T20:55:47.395076Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65045,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.403414Z",
"updated_at": "2025-01-29T20:55:47.403427Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65046,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.411737Z",
"updated_at": "2025-01-29T20:55:47.411750Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65047,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.420069Z",
"updated_at": "2025-01-29T20:55:47.420082Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65048,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.428492Z",
"updated_at": "2025-01-29T20:55:47.428510Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65049,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.436720Z",
"updated_at": "2025-01-29T20:55:47.436735Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65050,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.445006Z",
"updated_at": "2025-01-29T20:55:47.445019Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65051,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.453400Z",
"updated_at": "2025-01-29T20:55:47.453413Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65052,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.461698Z",
"updated_at": "2025-01-29T20:55:47.461712Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65053,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.470058Z",
"updated_at": "2025-01-29T20:55:47.470071Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65054,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "adipose",
"analysis_group": 2,
"source_file": 2109,
"created_at": "2025-01-29T20:55:47.479128Z",
"updated_at": "2025-01-29T20:55:47.479167Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2108,
"name": "s63_adiposetissue_1.raw",
"description": "s63_adiposetissue_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:46.940570Z",
"updated_at": "2025-01-29T20:55:46.940592Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 65001,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 63",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:46.948551Z",
"updated_at": "2025-01-29T20:55:46.948571Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65002,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:46.956658Z",
"updated_at": "2025-01-29T20:55:46.956671Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65003,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "adipose",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:46.964979Z",
"updated_at": "2025-01-29T20:55:46.964993Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65004,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:46.973270Z",
"updated_at": "2025-01-29T20:55:46.973284Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65005,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:46.981614Z",
"updated_at": "2025-01-29T20:55:46.981628Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 65006,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:46.989938Z",
"updated_at": "2025-01-29T20:55:46.989952Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65007,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:46.998946Z",
"updated_at": "2025-01-29T20:55:46.998983Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65008,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.006576Z",
"updated_at": "2025-01-29T20:55:47.006590Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65009,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.014914Z",
"updated_at": "2025-01-29T20:55:47.014928Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65010,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.023268Z",
"updated_at": "2025-01-29T20:55:47.023283Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65011,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.031609Z",
"updated_at": "2025-01-29T20:55:47.031623Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65012,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.039968Z",
"updated_at": "2025-01-29T20:55:47.039982Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65013,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 63",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.048292Z",
"updated_at": "2025-01-29T20:55:47.048305Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65014,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.056687Z",
"updated_at": "2025-01-29T20:55:47.056701Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65015,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s63_adiposetissue_1.raw",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.064971Z",
"updated_at": "2025-01-29T20:55:47.064983Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65016,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s63_adiposetissue_1.raw",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.073315Z",
"updated_at": "2025-01-29T20:55:47.073328Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65017,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.081654Z",
"updated_at": "2025-01-29T20:55:47.081668Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65018,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.089935Z",
"updated_at": "2025-01-29T20:55:47.089950Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65019,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.098332Z",
"updated_at": "2025-01-29T20:55:47.098346Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65020,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.107445Z",
"updated_at": "2025-01-29T20:55:47.107485Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65021,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.115002Z",
"updated_at": "2025-01-29T20:55:47.115016Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65022,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.123319Z",
"updated_at": "2025-01-29T20:55:47.123333Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65023,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.131655Z",
"updated_at": "2025-01-29T20:55:47.131669Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65024,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.139995Z",
"updated_at": "2025-01-29T20:55:47.140009Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65025,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.148358Z",
"updated_at": "2025-01-29T20:55:47.148389Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65026,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.156695Z",
"updated_at": "2025-01-29T20:55:47.156708Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65027,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "adipose",
"analysis_group": 2,
"source_file": 2108,
"created_at": "2025-01-29T20:55:47.164991Z",
"updated_at": "2025-01-29T20:55:47.165004Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2107,
"name": "s62_pancreas_2.raw",
"description": "s62_pancreas_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:46.687445Z",
"updated_at": "2025-01-29T20:55:46.687462Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64974,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 62",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.694846Z",
"updated_at": "2025-01-29T20:55:46.694858Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64975,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.703077Z",
"updated_at": "2025-01-29T20:55:46.703088Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64976,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "pancreas",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.711536Z",
"updated_at": "2025-01-29T20:55:46.711548Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64977,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.719879Z",
"updated_at": "2025-01-29T20:55:46.719893Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64978,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.728225Z",
"updated_at": "2025-01-29T20:55:46.728240Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64979,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.736574Z",
"updated_at": "2025-01-29T20:55:46.736586Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64980,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.744902Z",
"updated_at": "2025-01-29T20:55:46.744914Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64981,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.753199Z",
"updated_at": "2025-01-29T20:55:46.753212Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64982,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.761551Z",
"updated_at": "2025-01-29T20:55:46.761563Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64983,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.769844Z",
"updated_at": "2025-01-29T20:55:46.769857Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64984,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.778358Z",
"updated_at": "2025-01-29T20:55:46.778377Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64985,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.786360Z",
"updated_at": "2025-01-29T20:55:46.786369Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64986,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 62",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.794873Z",
"updated_at": "2025-01-29T20:55:46.794887Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64987,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.803232Z",
"updated_at": "2025-01-29T20:55:46.803244Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64988,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s62_pancreas_2.raw",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.811575Z",
"updated_at": "2025-01-29T20:55:46.811587Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64989,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s62_pancreas_2.raw",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.819939Z",
"updated_at": "2025-01-29T20:55:46.819954Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64990,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.828237Z",
"updated_at": "2025-01-29T20:55:46.828249Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64991,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.836595Z",
"updated_at": "2025-01-29T20:55:46.836608Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64992,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.844872Z",
"updated_at": "2025-01-29T20:55:46.844884Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64993,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.853240Z",
"updated_at": "2025-01-29T20:55:46.853253Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64994,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.861583Z",
"updated_at": "2025-01-29T20:55:46.861596Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64995,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.869906Z",
"updated_at": "2025-01-29T20:55:46.869919Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64996,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.878164Z",
"updated_at": "2025-01-29T20:55:46.878177Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64997,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.886614Z",
"updated_at": "2025-01-29T20:55:46.886628Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64998,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.895875Z",
"updated_at": "2025-01-29T20:55:46.895917Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64999,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.906908Z",
"updated_at": "2025-01-29T20:55:46.906929Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 65000,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "pancreas",
"analysis_group": 2,
"source_file": 2107,
"created_at": "2025-01-29T20:55:46.914958Z",
"updated_at": "2025-01-29T20:55:46.914972Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2106,
"name": "s61_pancreas_1.raw",
"description": "s61_pancreas_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:46.438469Z",
"updated_at": "2025-01-29T20:55:46.438488Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64947,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 61",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.448152Z",
"updated_at": "2025-01-29T20:55:46.448166Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64948,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.456404Z",
"updated_at": "2025-01-29T20:55:46.456420Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64949,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "pancreas",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.464839Z",
"updated_at": "2025-01-29T20:55:46.464853Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64950,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.473126Z",
"updated_at": "2025-01-29T20:55:46.473138Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64951,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.481489Z",
"updated_at": "2025-01-29T20:55:46.481502Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64952,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.489762Z",
"updated_at": "2025-01-29T20:55:46.489776Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64953,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.498319Z",
"updated_at": "2025-01-29T20:55:46.498337Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64954,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.506466Z",
"updated_at": "2025-01-29T20:55:46.506478Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64955,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.514822Z",
"updated_at": "2025-01-29T20:55:46.514835Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64956,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.523143Z",
"updated_at": "2025-01-29T20:55:46.523156Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64957,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.531494Z",
"updated_at": "2025-01-29T20:55:46.531507Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64958,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.539813Z",
"updated_at": "2025-01-29T20:55:46.539826Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64959,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 61",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.548153Z",
"updated_at": "2025-01-29T20:55:46.548166Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64960,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.556423Z",
"updated_at": "2025-01-29T20:55:46.556436Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64961,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s61_pancreas_1.raw",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.565080Z",
"updated_at": "2025-01-29T20:55:46.565098Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64962,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s61_pancreas_1.raw",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.573139Z",
"updated_at": "2025-01-29T20:55:46.573152Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64963,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.582194Z",
"updated_at": "2025-01-29T20:55:46.582251Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64964,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.589829Z",
"updated_at": "2025-01-29T20:55:46.589841Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64965,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.598155Z",
"updated_at": "2025-01-29T20:55:46.598168Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64966,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.606528Z",
"updated_at": "2025-01-29T20:55:46.606541Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64967,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.614837Z",
"updated_at": "2025-01-29T20:55:46.614849Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64968,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.623130Z",
"updated_at": "2025-01-29T20:55:46.623143Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64969,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.631533Z",
"updated_at": "2025-01-29T20:55:46.631545Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64970,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.639858Z",
"updated_at": "2025-01-29T20:55:46.639871Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64971,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.648201Z",
"updated_at": "2025-01-29T20:55:46.648215Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64972,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.656591Z",
"updated_at": "2025-01-29T20:55:46.656602Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64973,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "pancreas",
"analysis_group": 2,
"source_file": 2106,
"created_at": "2025-01-29T20:55:46.664872Z",
"updated_at": "2025-01-29T20:55:46.664885Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2105,
"name": "s60_thyroid_2.raw",
"description": "s60_thyroid_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:46.184963Z",
"updated_at": "2025-01-29T20:55:46.184981Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64920,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 60",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.195572Z",
"updated_at": "2025-01-29T20:55:46.195609Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64921,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.206679Z",
"updated_at": "2025-01-29T20:55:46.206700Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64922,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "thyroid",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.214739Z",
"updated_at": "2025-01-29T20:55:46.214752Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64923,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.223043Z",
"updated_at": "2025-01-29T20:55:46.223055Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64924,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.231403Z",
"updated_at": "2025-01-29T20:55:46.231416Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64925,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.239731Z",
"updated_at": "2025-01-29T20:55:46.239745Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64926,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.248046Z",
"updated_at": "2025-01-29T20:55:46.248058Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64927,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.256285Z",
"updated_at": "2025-01-29T20:55:46.256296Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64928,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.264995Z",
"updated_at": "2025-01-29T20:55:46.265013Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64929,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.273076Z",
"updated_at": "2025-01-29T20:55:46.273090Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64930,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.281416Z",
"updated_at": "2025-01-29T20:55:46.281429Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64931,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.289675Z",
"updated_at": "2025-01-29T20:55:46.289688Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64932,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 60",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.298813Z",
"updated_at": "2025-01-29T20:55:46.298853Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64933,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.306408Z",
"updated_at": "2025-01-29T20:55:46.306422Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64934,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s60_thyroid_2.raw",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.314781Z",
"updated_at": "2025-01-29T20:55:46.314793Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64935,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s60_thyroid_2.raw",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.323108Z",
"updated_at": "2025-01-29T20:55:46.323121Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64936,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.331456Z",
"updated_at": "2025-01-29T20:55:46.331468Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64937,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.339772Z",
"updated_at": "2025-01-29T20:55:46.339784Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64938,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.348264Z",
"updated_at": "2025-01-29T20:55:46.348281Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64939,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.356380Z",
"updated_at": "2025-01-29T20:55:46.356394Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64940,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.364819Z",
"updated_at": "2025-01-29T20:55:46.364833Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64941,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.373068Z",
"updated_at": "2025-01-29T20:55:46.373080Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64942,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.381456Z",
"updated_at": "2025-01-29T20:55:46.381468Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64943,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.389812Z",
"updated_at": "2025-01-29T20:55:46.389825Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64944,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.398122Z",
"updated_at": "2025-01-29T20:55:46.398135Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64945,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.406446Z",
"updated_at": "2025-01-29T20:55:46.406459Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64946,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "thyroid",
"analysis_group": 2,
"source_file": 2105,
"created_at": "2025-01-29T20:55:46.414782Z",
"updated_at": "2025-01-29T20:55:46.414795Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2104,
"name": "s59_thyroid_1.raw",
"description": "s59_thyroid_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:45.929897Z",
"updated_at": "2025-01-29T20:55:45.929913Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64893,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 59",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:45.940559Z",
"updated_at": "2025-01-29T20:55:45.940597Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64894,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:45.948026Z",
"updated_at": "2025-01-29T20:55:45.948040Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64895,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "thyroid",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:45.956338Z",
"updated_at": "2025-01-29T20:55:45.956351Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64896,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:45.964720Z",
"updated_at": "2025-01-29T20:55:45.964734Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64897,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:45.972995Z",
"updated_at": "2025-01-29T20:55:45.973007Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64898,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:45.981362Z",
"updated_at": "2025-01-29T20:55:45.981376Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64899,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:45.989633Z",
"updated_at": "2025-01-29T20:55:45.989646Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64900,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:45.998249Z",
"updated_at": "2025-01-29T20:55:45.998269Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64901,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.006344Z",
"updated_at": "2025-01-29T20:55:46.006356Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64902,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.014733Z",
"updated_at": "2025-01-29T20:55:46.014746Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64903,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.023086Z",
"updated_at": "2025-01-29T20:55:46.023101Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64904,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.031363Z",
"updated_at": "2025-01-29T20:55:46.031378Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64905,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 59",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.039465Z",
"updated_at": "2025-01-29T20:55:46.039473Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64906,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.048070Z",
"updated_at": "2025-01-29T20:55:46.048082Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64907,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s59_thyroid_1.raw",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.056414Z",
"updated_at": "2025-01-29T20:55:46.056428Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64908,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s59_thyroid_1.raw",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.064704Z",
"updated_at": "2025-01-29T20:55:46.064717Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64909,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.072983Z",
"updated_at": "2025-01-29T20:55:46.072995Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64910,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.081408Z",
"updated_at": "2025-01-29T20:55:46.081421Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64911,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.089915Z",
"updated_at": "2025-01-29T20:55:46.089935Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64912,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.097967Z",
"updated_at": "2025-01-29T20:55:46.097981Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64913,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.106121Z",
"updated_at": "2025-01-29T20:55:46.106129Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64914,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.114740Z",
"updated_at": "2025-01-29T20:55:46.114753Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64915,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.123057Z",
"updated_at": "2025-01-29T20:55:46.123071Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64916,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.131405Z",
"updated_at": "2025-01-29T20:55:46.131419Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64917,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.139729Z",
"updated_at": "2025-01-29T20:55:46.139743Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64918,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.148115Z",
"updated_at": "2025-01-29T20:55:46.148130Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64919,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "thyroid",
"analysis_group": 2,
"source_file": 2104,
"created_at": "2025-01-29T20:55:46.156503Z",
"updated_at": "2025-01-29T20:55:46.156515Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2103,
"name": "s58_ureter_2.raw",
"description": "s58_ureter_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:45.555839Z",
"updated_at": "2025-01-29T20:55:45.555856Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64866,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 58",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.564611Z",
"updated_at": "2025-01-29T20:55:45.564625Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64867,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.572870Z",
"updated_at": "2025-01-29T20:55:45.572882Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64868,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "ureter",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.582011Z",
"updated_at": "2025-01-29T20:55:45.582052Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64869,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.589584Z",
"updated_at": "2025-01-29T20:55:45.589598Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64870,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.598040Z",
"updated_at": "2025-01-29T20:55:45.598060Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64871,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.606262Z",
"updated_at": "2025-01-29T20:55:45.606275Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64872,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.614615Z",
"updated_at": "2025-01-29T20:55:45.614629Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64873,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.622939Z",
"updated_at": "2025-01-29T20:55:45.622953Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64874,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.631267Z",
"updated_at": "2025-01-29T20:55:45.631282Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64875,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.639605Z",
"updated_at": "2025-01-29T20:55:45.639619Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64876,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.647949Z",
"updated_at": "2025-01-29T20:55:45.647964Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64877,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.656299Z",
"updated_at": "2025-01-29T20:55:45.656314Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64878,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 58",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.664611Z",
"updated_at": "2025-01-29T20:55:45.664624Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64879,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.672944Z",
"updated_at": "2025-01-29T20:55:45.672958Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64880,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s58_ureter_2.raw",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.748901Z",
"updated_at": "2025-01-29T20:55:45.748945Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64881,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s58_ureter_2.raw",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.756296Z",
"updated_at": "2025-01-29T20:55:45.756311Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64882,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.820214Z",
"updated_at": "2025-01-29T20:55:45.820232Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64883,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.828092Z",
"updated_at": "2025-01-29T20:55:45.828112Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64884,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.836299Z",
"updated_at": "2025-01-29T20:55:45.836314Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64885,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.844682Z",
"updated_at": "2025-01-29T20:55:45.844698Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64886,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.852954Z",
"updated_at": "2025-01-29T20:55:45.852968Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64887,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.861334Z",
"updated_at": "2025-01-29T20:55:45.861348Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64888,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.869652Z",
"updated_at": "2025-01-29T20:55:45.869665Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64889,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.877993Z",
"updated_at": "2025-01-29T20:55:45.878006Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64890,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.886327Z",
"updated_at": "2025-01-29T20:55:45.886341Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64891,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.894664Z",
"updated_at": "2025-01-29T20:55:45.894679Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64892,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "ureter",
"analysis_group": 2,
"source_file": 2103,
"created_at": "2025-01-29T20:55:45.902996Z",
"updated_at": "2025-01-29T20:55:45.903010Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2102,
"name": "s57_ureter_1.raw",
"description": "s57_ureter_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:45.207652Z",
"updated_at": "2025-01-29T20:55:45.207671Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64839,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 57",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.214534Z",
"updated_at": "2025-01-29T20:55:45.214550Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64840,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.222810Z",
"updated_at": "2025-01-29T20:55:45.222824Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64841,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "ureter",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.231146Z",
"updated_at": "2025-01-29T20:55:45.231160Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64842,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.239553Z",
"updated_at": "2025-01-29T20:55:45.239569Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64843,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.247889Z",
"updated_at": "2025-01-29T20:55:45.247903Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64844,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.256204Z",
"updated_at": "2025-01-29T20:55:45.256218Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64845,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.264551Z",
"updated_at": "2025-01-29T20:55:45.264565Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64846,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.272866Z",
"updated_at": "2025-01-29T20:55:45.272879Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64847,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.281105Z",
"updated_at": "2025-01-29T20:55:45.281119Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64848,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.289430Z",
"updated_at": "2025-01-29T20:55:45.289444Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64849,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.298000Z",
"updated_at": "2025-01-29T20:55:45.298018Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64850,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.306374Z",
"updated_at": "2025-01-29T20:55:45.306393Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64851,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 57",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.314506Z",
"updated_at": "2025-01-29T20:55:45.314520Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64852,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.322843Z",
"updated_at": "2025-01-29T20:55:45.322858Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64853,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s57_ureter_1.raw",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.331169Z",
"updated_at": "2025-01-29T20:55:45.331183Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64854,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s57_ureter_1.raw",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.339511Z",
"updated_at": "2025-01-29T20:55:45.339524Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64855,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.347841Z",
"updated_at": "2025-01-29T20:55:45.347856Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64856,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.356236Z",
"updated_at": "2025-01-29T20:55:45.356251Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64857,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.364586Z",
"updated_at": "2025-01-29T20:55:45.364600Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64858,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.372913Z",
"updated_at": "2025-01-29T20:55:45.372929Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64859,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.381221Z",
"updated_at": "2025-01-29T20:55:45.381236Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64860,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.396632Z",
"updated_at": "2025-01-29T20:55:45.396669Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64861,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.495801Z",
"updated_at": "2025-01-29T20:55:45.495842Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64862,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.507187Z",
"updated_at": "2025-01-29T20:55:45.507228Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64863,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.514589Z",
"updated_at": "2025-01-29T20:55:45.514603Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64864,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.522943Z",
"updated_at": "2025-01-29T20:55:45.522963Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64865,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "ureter",
"analysis_group": 2,
"source_file": 2102,
"created_at": "2025-01-29T20:55:45.531181Z",
"updated_at": "2025-01-29T20:55:45.531195Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2101,
"name": "s56_gallbladder_2.raw",
"description": "s56_gallbladder_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:44.886888Z",
"updated_at": "2025-01-29T20:55:44.886900Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64812,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 56",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:44.897751Z",
"updated_at": "2025-01-29T20:55:44.897765Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64813,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:44.906100Z",
"updated_at": "2025-01-29T20:55:44.906114Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64814,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "gallbladder",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:44.914454Z",
"updated_at": "2025-01-29T20:55:44.914469Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64815,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:44.922817Z",
"updated_at": "2025-01-29T20:55:44.922832Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64816,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:44.994701Z",
"updated_at": "2025-01-29T20:55:44.994721Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64817,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.002799Z",
"updated_at": "2025-01-29T20:55:45.002815Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64818,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.011173Z",
"updated_at": "2025-01-29T20:55:45.011188Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64819,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.019669Z",
"updated_at": "2025-01-29T20:55:45.019689Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64820,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.028023Z",
"updated_at": "2025-01-29T20:55:45.028044Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64821,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.036159Z",
"updated_at": "2025-01-29T20:55:45.036175Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64822,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.044521Z",
"updated_at": "2025-01-29T20:55:45.044537Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64823,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.052840Z",
"updated_at": "2025-01-29T20:55:45.052856Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64824,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 56",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.061069Z",
"updated_at": "2025-01-29T20:55:45.061084Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64825,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.069698Z",
"updated_at": "2025-01-29T20:55:45.069719Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64826,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s56_gallbladder_2.raw",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.078016Z",
"updated_at": "2025-01-29T20:55:45.078037Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64827,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s56_gallbladder_2.raw",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.086416Z",
"updated_at": "2025-01-29T20:55:45.086437Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64828,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.094558Z",
"updated_at": "2025-01-29T20:55:45.094572Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64829,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.102948Z",
"updated_at": "2025-01-29T20:55:45.102966Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64830,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.111229Z",
"updated_at": "2025-01-29T20:55:45.111244Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64831,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.119549Z",
"updated_at": "2025-01-29T20:55:45.119565Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64832,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.127877Z",
"updated_at": "2025-01-29T20:55:45.127893Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64833,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.136196Z",
"updated_at": "2025-01-29T20:55:45.136211Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64834,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.144578Z",
"updated_at": "2025-01-29T20:55:45.144594Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64835,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.152888Z",
"updated_at": "2025-01-29T20:55:45.152903Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64836,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.161220Z",
"updated_at": "2025-01-29T20:55:45.161235Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64837,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.169530Z",
"updated_at": "2025-01-29T20:55:45.169545Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64838,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "gallbladder",
"analysis_group": 2,
"source_file": 2101,
"created_at": "2025-01-29T20:55:45.177866Z",
"updated_at": "2025-01-29T20:55:45.177882Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2100,
"name": "s55_gallbladder_1.raw",
"description": "s55_gallbladder_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:44.470105Z",
"updated_at": "2025-01-29T20:55:44.470124Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64785,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 55",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.477718Z",
"updated_at": "2025-01-29T20:55:44.477733Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64786,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.486096Z",
"updated_at": "2025-01-29T20:55:44.486110Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64787,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "gallbladder",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.494425Z",
"updated_at": "2025-01-29T20:55:44.494440Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64788,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.502692Z",
"updated_at": "2025-01-29T20:55:44.502711Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64789,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.511092Z",
"updated_at": "2025-01-29T20:55:44.511106Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64790,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.519426Z",
"updated_at": "2025-01-29T20:55:44.519441Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64791,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.527800Z",
"updated_at": "2025-01-29T20:55:44.527815Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64792,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.536098Z",
"updated_at": "2025-01-29T20:55:44.536112Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64793,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.544463Z",
"updated_at": "2025-01-29T20:55:44.544479Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64794,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.552892Z",
"updated_at": "2025-01-29T20:55:44.552908Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64795,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.561204Z",
"updated_at": "2025-01-29T20:55:44.561223Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64796,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.569454Z",
"updated_at": "2025-01-29T20:55:44.569468Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64797,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 55",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.577933Z",
"updated_at": "2025-01-29T20:55:44.577953Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64798,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.586130Z",
"updated_at": "2025-01-29T20:55:44.586144Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64799,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s55_gallbladder_1.raw",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.594466Z",
"updated_at": "2025-01-29T20:55:44.594479Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64800,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s55_gallbladder_1.raw",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.602787Z",
"updated_at": "2025-01-29T20:55:44.602802Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64801,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.611162Z",
"updated_at": "2025-01-29T20:55:44.611179Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64802,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.619472Z",
"updated_at": "2025-01-29T20:55:44.619486Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64803,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.627799Z",
"updated_at": "2025-01-29T20:55:44.627813Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64804,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.636132Z",
"updated_at": "2025-01-29T20:55:44.636147Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64805,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.644438Z",
"updated_at": "2025-01-29T20:55:44.644454Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64806,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.652817Z",
"updated_at": "2025-01-29T20:55:44.652831Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64807,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.661137Z",
"updated_at": "2025-01-29T20:55:44.661151Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64808,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.669416Z",
"updated_at": "2025-01-29T20:55:44.669430Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64809,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.748243Z",
"updated_at": "2025-01-29T20:55:44.748282Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64810,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.756336Z",
"updated_at": "2025-01-29T20:55:44.756361Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64811,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "gallbladder",
"analysis_group": 2,
"source_file": 2100,
"created_at": "2025-01-29T20:55:44.833225Z",
"updated_at": "2025-01-29T20:55:44.833267Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2099,
"name": "s54_uterus_2.raw",
"description": "s54_uterus_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:44.212374Z",
"updated_at": "2025-01-29T20:55:44.212397Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64758,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 54",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.222663Z",
"updated_at": "2025-01-29T20:55:44.222679Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64759,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.230979Z",
"updated_at": "2025-01-29T20:55:44.230994Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64760,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "uterus",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.239296Z",
"updated_at": "2025-01-29T20:55:44.239311Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64761,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.247660Z",
"updated_at": "2025-01-29T20:55:44.247675Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64762,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.255997Z",
"updated_at": "2025-01-29T20:55:44.256012Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64763,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.264333Z",
"updated_at": "2025-01-29T20:55:44.264348Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64764,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.272728Z",
"updated_at": "2025-01-29T20:55:44.272744Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64765,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.280855Z",
"updated_at": "2025-01-29T20:55:44.280867Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64766,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.289331Z",
"updated_at": "2025-01-29T20:55:44.289345Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64767,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.297705Z",
"updated_at": "2025-01-29T20:55:44.297721Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64768,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.305998Z",
"updated_at": "2025-01-29T20:55:44.306012Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64769,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.314328Z",
"updated_at": "2025-01-29T20:55:44.314343Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64770,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 54",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.322704Z",
"updated_at": "2025-01-29T20:55:44.322720Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64771,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.331003Z",
"updated_at": "2025-01-29T20:55:44.331018Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64772,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s54_uterus_2.raw",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.339333Z",
"updated_at": "2025-01-29T20:55:44.339349Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64773,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s54_uterus_2.raw",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.347645Z",
"updated_at": "2025-01-29T20:55:44.347661Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64774,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.356002Z",
"updated_at": "2025-01-29T20:55:44.356018Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64775,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.364344Z",
"updated_at": "2025-01-29T20:55:44.364359Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64776,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.372715Z",
"updated_at": "2025-01-29T20:55:44.372730Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64777,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.380884Z",
"updated_at": "2025-01-29T20:55:44.380897Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64778,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.389334Z",
"updated_at": "2025-01-29T20:55:44.389348Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64779,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.397754Z",
"updated_at": "2025-01-29T20:55:44.397769Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64780,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.406042Z",
"updated_at": "2025-01-29T20:55:44.406056Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64781,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.414370Z",
"updated_at": "2025-01-29T20:55:44.414385Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64782,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.422716Z",
"updated_at": "2025-01-29T20:55:44.422731Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64783,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.431033Z",
"updated_at": "2025-01-29T20:55:44.431047Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64784,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "uterus",
"analysis_group": 2,
"source_file": 2099,
"created_at": "2025-01-29T20:55:44.439373Z",
"updated_at": "2025-01-29T20:55:44.439387Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2098,
"name": "s53_uterus_1.raw",
"description": "s53_uterus_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:43.959086Z",
"updated_at": "2025-01-29T20:55:43.959102Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64731,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 53",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:43.969354Z",
"updated_at": "2025-01-29T20:55:43.969371Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64732,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:43.977723Z",
"updated_at": "2025-01-29T20:55:43.977741Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64733,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "uterus",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:43.985931Z",
"updated_at": "2025-01-29T20:55:43.985945Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64734,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:43.994259Z",
"updated_at": "2025-01-29T20:55:43.994273Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64735,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.002513Z",
"updated_at": "2025-01-29T20:55:44.002525Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64736,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.010909Z",
"updated_at": "2025-01-29T20:55:44.010921Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64737,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.019472Z",
"updated_at": "2025-01-29T20:55:44.019492Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64738,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.027641Z",
"updated_at": "2025-01-29T20:55:44.027657Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64739,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.035938Z",
"updated_at": "2025-01-29T20:55:44.035953Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64740,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.044279Z",
"updated_at": "2025-01-29T20:55:44.044293Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64741,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.052662Z",
"updated_at": "2025-01-29T20:55:44.052677Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64742,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.060947Z",
"updated_at": "2025-01-29T20:55:44.060961Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64743,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 53",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.069276Z",
"updated_at": "2025-01-29T20:55:44.069291Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64744,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.077605Z",
"updated_at": "2025-01-29T20:55:44.077620Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64745,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s53_uterus_1.raw",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.086144Z",
"updated_at": "2025-01-29T20:55:44.086165Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64746,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s53_uterus_1.raw",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.094282Z",
"updated_at": "2025-01-29T20:55:44.094295Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64747,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.102637Z",
"updated_at": "2025-01-29T20:55:44.102652Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64748,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.111185Z",
"updated_at": "2025-01-29T20:55:44.111204Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64749,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.119332Z",
"updated_at": "2025-01-29T20:55:44.119347Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64750,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.127722Z",
"updated_at": "2025-01-29T20:55:44.127737Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64751,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.135987Z",
"updated_at": "2025-01-29T20:55:44.136001Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64752,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.144345Z",
"updated_at": "2025-01-29T20:55:44.144359Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64753,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.152710Z",
"updated_at": "2025-01-29T20:55:44.152725Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64754,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.160986Z",
"updated_at": "2025-01-29T20:55:44.161000Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64755,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.169216Z",
"updated_at": "2025-01-29T20:55:44.169228Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64756,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.177601Z",
"updated_at": "2025-01-29T20:55:44.177615Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64757,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "uterus",
"analysis_group": 2,
"source_file": 2098,
"created_at": "2025-01-29T20:55:44.186179Z",
"updated_at": "2025-01-29T20:55:44.186198Z",
"not_applicable": false,
"mandatory": false
}
]
}
]
}