HTTP 200 OK
Allow: GET, POST, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept
{
"count": 95,
"next": "https://cinder.proteo.info/api/source_files/?format=api&ordering=-created_at&page=4",
"previous": "https://cinder.proteo.info/api/source_files/?format=api&ordering=-created_at&page=2",
"results": [
{
"id": 2097,
"name": "s52_duodenum_2.raw",
"description": "s52_duodenum_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:43.643781Z",
"updated_at": "2025-01-29T20:55:43.643798Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64704,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 52",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.652723Z",
"updated_at": "2025-01-29T20:55:43.652742Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64705,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.660879Z",
"updated_at": "2025-01-29T20:55:43.660893Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64706,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "duodenum",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.669188Z",
"updated_at": "2025-01-29T20:55:43.669202Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64707,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.677560Z",
"updated_at": "2025-01-29T20:55:43.677575Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64708,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.685852Z",
"updated_at": "2025-01-29T20:55:43.685866Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64709,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.694192Z",
"updated_at": "2025-01-29T20:55:43.694206Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64710,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.702633Z",
"updated_at": "2025-01-29T20:55:43.702652Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64711,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.710856Z",
"updated_at": "2025-01-29T20:55:43.710870Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64712,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.719192Z",
"updated_at": "2025-01-29T20:55:43.719206Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64713,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.727560Z",
"updated_at": "2025-01-29T20:55:43.727576Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64714,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.735858Z",
"updated_at": "2025-01-29T20:55:43.735872Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64715,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.744246Z",
"updated_at": "2025-01-29T20:55:43.744262Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64716,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 52",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.752615Z",
"updated_at": "2025-01-29T20:55:43.752630Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64717,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.760902Z",
"updated_at": "2025-01-29T20:55:43.760915Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64718,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s52_duodenum_2.raw",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.830982Z",
"updated_at": "2025-01-29T20:55:43.831001Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64719,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s52_duodenum_2.raw",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.839374Z",
"updated_at": "2025-01-29T20:55:43.839393Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64720,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.847551Z",
"updated_at": "2025-01-29T20:55:43.847566Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64721,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.855836Z",
"updated_at": "2025-01-29T20:55:43.855850Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64722,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.864185Z",
"updated_at": "2025-01-29T20:55:43.864199Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64723,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.872554Z",
"updated_at": "2025-01-29T20:55:43.872568Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64724,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.880921Z",
"updated_at": "2025-01-29T20:55:43.880936Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64725,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.889173Z",
"updated_at": "2025-01-29T20:55:43.889188Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64726,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.897465Z",
"updated_at": "2025-01-29T20:55:43.897480Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64727,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.905822Z",
"updated_at": "2025-01-29T20:55:43.905836Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64728,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.914195Z",
"updated_at": "2025-01-29T20:55:43.914210Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64729,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.922551Z",
"updated_at": "2025-01-29T20:55:43.922566Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64730,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "duodenum",
"analysis_group": 2,
"source_file": 2097,
"created_at": "2025-01-29T20:55:43.930844Z",
"updated_at": "2025-01-29T20:55:43.930858Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2096,
"name": "s51_duodenum_1.raw",
"description": "s51_duodenum_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:43.347191Z",
"updated_at": "2025-01-29T20:55:43.347208Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64677,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 51",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.355805Z",
"updated_at": "2025-01-29T20:55:43.355823Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64678,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.364098Z",
"updated_at": "2025-01-29T20:55:43.364112Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64679,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "duodenum",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.372391Z",
"updated_at": "2025-01-29T20:55:43.372405Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64680,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.380798Z",
"updated_at": "2025-01-29T20:55:43.380814Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64681,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.388972Z",
"updated_at": "2025-01-29T20:55:43.388987Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64682,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.397356Z",
"updated_at": "2025-01-29T20:55:43.397372Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64683,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.405732Z",
"updated_at": "2025-01-29T20:55:43.405746Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64684,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.414054Z",
"updated_at": "2025-01-29T20:55:43.414068Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64685,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.422308Z",
"updated_at": "2025-01-29T20:55:43.422323Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64686,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.430777Z",
"updated_at": "2025-01-29T20:55:43.430792Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64687,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.439108Z",
"updated_at": "2025-01-29T20:55:43.439122Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64688,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.447461Z",
"updated_at": "2025-01-29T20:55:43.447477Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64689,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 51",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.455787Z",
"updated_at": "2025-01-29T20:55:43.455801Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64690,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.464151Z",
"updated_at": "2025-01-29T20:55:43.464165Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64691,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s51_duodenum_1.raw",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.472353Z",
"updated_at": "2025-01-29T20:55:43.472377Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64692,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s51_duodenum_1.raw",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.480760Z",
"updated_at": "2025-01-29T20:55:43.480773Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64693,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.489096Z",
"updated_at": "2025-01-29T20:55:43.489110Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64694,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.497438Z",
"updated_at": "2025-01-29T20:55:43.497453Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64695,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.505802Z",
"updated_at": "2025-01-29T20:55:43.505815Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64696,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.514167Z",
"updated_at": "2025-01-29T20:55:43.514181Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64697,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.522485Z",
"updated_at": "2025-01-29T20:55:43.522499Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64698,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.530817Z",
"updated_at": "2025-01-29T20:55:43.530830Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64699,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.539109Z",
"updated_at": "2025-01-29T20:55:43.539126Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64700,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.586556Z",
"updated_at": "2025-01-29T20:55:43.586594Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64701,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.598429Z",
"updated_at": "2025-01-29T20:55:43.598473Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64702,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.605861Z",
"updated_at": "2025-01-29T20:55:43.605875Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64703,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "duodenum",
"analysis_group": 2,
"source_file": 2096,
"created_at": "2025-01-29T20:55:43.614217Z",
"updated_at": "2025-01-29T20:55:43.614230Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2095,
"name": "s50_spleen_2.raw",
"description": "s50_spleen_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:43.094195Z",
"updated_at": "2025-01-29T20:55:43.094214Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64650,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 50",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.102601Z",
"updated_at": "2025-01-29T20:55:43.102620Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64651,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.110712Z",
"updated_at": "2025-01-29T20:55:43.110726Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64652,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "spleen",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.119082Z",
"updated_at": "2025-01-29T20:55:43.119095Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64653,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.127431Z",
"updated_at": "2025-01-29T20:55:43.127445Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64654,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.135724Z",
"updated_at": "2025-01-29T20:55:43.135738Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64655,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.144076Z",
"updated_at": "2025-01-29T20:55:43.144090Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64656,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.152444Z",
"updated_at": "2025-01-29T20:55:43.152458Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64657,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.160743Z",
"updated_at": "2025-01-29T20:55:43.160756Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64658,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.168997Z",
"updated_at": "2025-01-29T20:55:43.169009Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64659,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.177605Z",
"updated_at": "2025-01-29T20:55:43.177623Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64660,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.185729Z",
"updated_at": "2025-01-29T20:55:43.185742Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64661,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.194071Z",
"updated_at": "2025-01-29T20:55:43.194084Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64662,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 50",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.202426Z",
"updated_at": "2025-01-29T20:55:43.202440Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64663,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.210732Z",
"updated_at": "2025-01-29T20:55:43.210745Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64664,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s50_spleen_2.raw",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.219077Z",
"updated_at": "2025-01-29T20:55:43.219091Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64665,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s50_spleen_2.raw",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.227436Z",
"updated_at": "2025-01-29T20:55:43.227451Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64666,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.235898Z",
"updated_at": "2025-01-29T20:55:43.235916Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64667,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.244004Z",
"updated_at": "2025-01-29T20:55:43.244018Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64668,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.252648Z",
"updated_at": "2025-01-29T20:55:43.252667Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64669,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.260796Z",
"updated_at": "2025-01-29T20:55:43.260809Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64670,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.269063Z",
"updated_at": "2025-01-29T20:55:43.269078Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64671,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.277478Z",
"updated_at": "2025-01-29T20:55:43.277493Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64672,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.285771Z",
"updated_at": "2025-01-29T20:55:43.285785Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64673,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.294119Z",
"updated_at": "2025-01-29T20:55:43.294132Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64674,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.302480Z",
"updated_at": "2025-01-29T20:55:43.302494Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64675,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.310772Z",
"updated_at": "2025-01-29T20:55:43.310786Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64676,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "spleen",
"analysis_group": 2,
"source_file": 2095,
"created_at": "2025-01-29T20:55:43.319050Z",
"updated_at": "2025-01-29T20:55:43.319064Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2094,
"name": "s49_spleen_1.raw",
"description": "s49_spleen_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:42.841396Z",
"updated_at": "2025-01-29T20:55:42.841412Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64623,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 49",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.847100Z",
"updated_at": "2025-01-29T20:55:42.847112Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64624,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.855614Z",
"updated_at": "2025-01-29T20:55:42.855629Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64625,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "spleen",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.863965Z",
"updated_at": "2025-01-29T20:55:42.863979Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64626,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.872391Z",
"updated_at": "2025-01-29T20:55:42.872411Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64627,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.880591Z",
"updated_at": "2025-01-29T20:55:42.880605Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64628,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.889059Z",
"updated_at": "2025-01-29T20:55:42.889079Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64629,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.897279Z",
"updated_at": "2025-01-29T20:55:42.897294Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64630,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.905589Z",
"updated_at": "2025-01-29T20:55:42.905603Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64631,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.913934Z",
"updated_at": "2025-01-29T20:55:42.913949Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64632,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.922308Z",
"updated_at": "2025-01-29T20:55:42.922325Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64633,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.930840Z",
"updated_at": "2025-01-29T20:55:42.930860Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64634,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.938974Z",
"updated_at": "2025-01-29T20:55:42.938989Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64635,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 49",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.947319Z",
"updated_at": "2025-01-29T20:55:42.947335Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64636,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.955629Z",
"updated_at": "2025-01-29T20:55:42.955644Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64637,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s49_spleen_1.raw",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.963964Z",
"updated_at": "2025-01-29T20:55:42.963979Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64638,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s49_spleen_1.raw",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.972359Z",
"updated_at": "2025-01-29T20:55:42.972389Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64639,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.980753Z",
"updated_at": "2025-01-29T20:55:42.980770Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64640,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.988974Z",
"updated_at": "2025-01-29T20:55:42.988988Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64641,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:42.997350Z",
"updated_at": "2025-01-29T20:55:42.997366Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64642,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:43.005641Z",
"updated_at": "2025-01-29T20:55:43.005654Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64643,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:43.013997Z",
"updated_at": "2025-01-29T20:55:43.014010Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64644,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:43.022552Z",
"updated_at": "2025-01-29T20:55:43.022572Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64645,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:43.030670Z",
"updated_at": "2025-01-29T20:55:43.030685Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64646,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:43.039006Z",
"updated_at": "2025-01-29T20:55:43.039020Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64647,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:43.047377Z",
"updated_at": "2025-01-29T20:55:43.047391Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64648,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:43.055883Z",
"updated_at": "2025-01-29T20:55:43.055902Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64649,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "spleen",
"analysis_group": 2,
"source_file": 2094,
"created_at": "2025-01-29T20:55:43.064009Z",
"updated_at": "2025-01-29T20:55:43.064023Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2093,
"name": "s48_breast_2.raw",
"description": "s48_breast_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:42.587297Z",
"updated_at": "2025-01-29T20:55:42.587311Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64596,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 48",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.597298Z",
"updated_at": "2025-01-29T20:55:42.597314Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64597,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.605575Z",
"updated_at": "2025-01-29T20:55:42.605588Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64598,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "breast",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.613902Z",
"updated_at": "2025-01-29T20:55:42.613915Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64599,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.622238Z",
"updated_at": "2025-01-29T20:55:42.622252Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64600,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.630568Z",
"updated_at": "2025-01-29T20:55:42.630582Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64601,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.638927Z",
"updated_at": "2025-01-29T20:55:42.638941Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64602,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.647236Z",
"updated_at": "2025-01-29T20:55:42.647264Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64603,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.655493Z",
"updated_at": "2025-01-29T20:55:42.655507Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64604,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.663884Z",
"updated_at": "2025-01-29T20:55:42.663896Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64605,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.673218Z",
"updated_at": "2025-01-29T20:55:42.673275Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64606,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.680585Z",
"updated_at": "2025-01-29T20:55:42.680599Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64607,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.688896Z",
"updated_at": "2025-01-29T20:55:42.688911Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64608,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 48",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.697195Z",
"updated_at": "2025-01-29T20:55:42.697211Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64609,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.706235Z",
"updated_at": "2025-01-29T20:55:42.706281Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64610,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s48_breast_2.raw",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.713700Z",
"updated_at": "2025-01-29T20:55:42.713712Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64611,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s48_breast_2.raw",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.722043Z",
"updated_at": "2025-01-29T20:55:42.722054Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64612,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.730605Z",
"updated_at": "2025-01-29T20:55:42.730618Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64613,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.738948Z",
"updated_at": "2025-01-29T20:55:42.738961Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64614,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.747293Z",
"updated_at": "2025-01-29T20:55:42.747308Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64615,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.755595Z",
"updated_at": "2025-01-29T20:55:42.755608Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64616,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.763946Z",
"updated_at": "2025-01-29T20:55:42.763959Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64617,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.772477Z",
"updated_at": "2025-01-29T20:55:42.772501Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64618,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.780609Z",
"updated_at": "2025-01-29T20:55:42.780621Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64619,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.788953Z",
"updated_at": "2025-01-29T20:55:42.788968Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64620,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.797263Z",
"updated_at": "2025-01-29T20:55:42.797276Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64621,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.805609Z",
"updated_at": "2025-01-29T20:55:42.805623Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64622,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "breast",
"analysis_group": 2,
"source_file": 2093,
"created_at": "2025-01-29T20:55:42.813940Z",
"updated_at": "2025-01-29T20:55:42.813953Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2092,
"name": "s47_breast_1.raw",
"description": "s47_breast_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:42.338136Z",
"updated_at": "2025-01-29T20:55:42.338150Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64569,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 47",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.347173Z",
"updated_at": "2025-01-29T20:55:42.347187Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64570,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.355523Z",
"updated_at": "2025-01-29T20:55:42.355537Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64571,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "breast",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.363770Z",
"updated_at": "2025-01-29T20:55:42.363785Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64572,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.372147Z",
"updated_at": "2025-01-29T20:55:42.372162Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64573,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.380542Z",
"updated_at": "2025-01-29T20:55:42.380554Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64574,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.388842Z",
"updated_at": "2025-01-29T20:55:42.388856Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64575,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.397149Z",
"updated_at": "2025-01-29T20:55:42.397161Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64576,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.405518Z",
"updated_at": "2025-01-29T20:55:42.405531Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64577,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.413859Z",
"updated_at": "2025-01-29T20:55:42.413872Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64578,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.422202Z",
"updated_at": "2025-01-29T20:55:42.422215Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64579,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.430518Z",
"updated_at": "2025-01-29T20:55:42.430531Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64580,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.438863Z",
"updated_at": "2025-01-29T20:55:42.438877Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64581,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 47",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.447325Z",
"updated_at": "2025-01-29T20:55:42.447344Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64582,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.455514Z",
"updated_at": "2025-01-29T20:55:42.455527Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64583,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s47_breast_1.raw",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.463790Z",
"updated_at": "2025-01-29T20:55:42.463803Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64584,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s47_breast_1.raw",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.472199Z",
"updated_at": "2025-01-29T20:55:42.472212Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64585,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.480580Z",
"updated_at": "2025-01-29T20:55:42.480594Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64586,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.488867Z",
"updated_at": "2025-01-29T20:55:42.488882Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64587,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.497179Z",
"updated_at": "2025-01-29T20:55:42.497191Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64588,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.505521Z",
"updated_at": "2025-01-29T20:55:42.505534Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64589,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.513866Z",
"updated_at": "2025-01-29T20:55:42.513880Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64590,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.522205Z",
"updated_at": "2025-01-29T20:55:42.522218Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64591,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.530519Z",
"updated_at": "2025-01-29T20:55:42.530531Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64592,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.538908Z",
"updated_at": "2025-01-29T20:55:42.538922Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64593,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.547234Z",
"updated_at": "2025-01-29T20:55:42.547249Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64594,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.555553Z",
"updated_at": "2025-01-29T20:55:42.555565Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64595,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "breast",
"analysis_group": 2,
"source_file": 2092,
"created_at": "2025-01-29T20:55:42.563890Z",
"updated_at": "2025-01-29T20:55:42.563902Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2091,
"name": "s46_bladder_2.raw",
"description": "s46_bladder_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:42.069331Z",
"updated_at": "2025-01-29T20:55:42.069356Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64542,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 46",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.077170Z",
"updated_at": "2025-01-29T20:55:42.077185Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64543,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.085382Z",
"updated_at": "2025-01-29T20:55:42.085393Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64544,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "bladder",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.093820Z",
"updated_at": "2025-01-29T20:55:42.093833Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64545,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.102083Z",
"updated_at": "2025-01-29T20:55:42.102096Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64546,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.110504Z",
"updated_at": "2025-01-29T20:55:42.110516Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64547,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.118866Z",
"updated_at": "2025-01-29T20:55:42.118878Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64548,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.127188Z",
"updated_at": "2025-01-29T20:55:42.127199Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64549,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.135515Z",
"updated_at": "2025-01-29T20:55:42.135529Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64550,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.143806Z",
"updated_at": "2025-01-29T20:55:42.143820Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64551,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.152173Z",
"updated_at": "2025-01-29T20:55:42.152185Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64552,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.160538Z",
"updated_at": "2025-01-29T20:55:42.160552Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64553,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.168860Z",
"updated_at": "2025-01-29T20:55:42.168874Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64554,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 46",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.177191Z",
"updated_at": "2025-01-29T20:55:42.177204Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64555,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.185509Z",
"updated_at": "2025-01-29T20:55:42.185523Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64556,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s46_bladder_2.raw",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.193860Z",
"updated_at": "2025-01-29T20:55:42.193874Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64557,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s46_bladder_2.raw",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.202183Z",
"updated_at": "2025-01-29T20:55:42.202196Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64558,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.210541Z",
"updated_at": "2025-01-29T20:55:42.210554Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64559,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.218884Z",
"updated_at": "2025-01-29T20:55:42.218897Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64560,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.227188Z",
"updated_at": "2025-01-29T20:55:42.227200Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64561,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.235552Z",
"updated_at": "2025-01-29T20:55:42.235565Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64562,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.243896Z",
"updated_at": "2025-01-29T20:55:42.243909Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64563,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.252230Z",
"updated_at": "2025-01-29T20:55:42.252243Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64564,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.260583Z",
"updated_at": "2025-01-29T20:55:42.260596Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64565,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.268885Z",
"updated_at": "2025-01-29T20:55:42.268898Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64566,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.280508Z",
"updated_at": "2025-01-29T20:55:42.280520Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64567,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.303028Z",
"updated_at": "2025-01-29T20:55:42.303069Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64568,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "bladder",
"analysis_group": 2,
"source_file": 2091,
"created_at": "2025-01-29T20:55:42.314090Z",
"updated_at": "2025-01-29T20:55:42.314111Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2090,
"name": "s45_bladder_1_20200129213259.raw",
"description": "s45_bladder_1_20200129213259.raw",
"file": null,
"created_at": "2025-01-29T20:55:41.743949Z",
"updated_at": "2025-01-29T20:55:41.743969Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64515,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 45",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.752128Z",
"updated_at": "2025-01-29T20:55:41.752142Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64516,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.760458Z",
"updated_at": "2025-01-29T20:55:41.760472Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64517,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "bladder",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.838945Z",
"updated_at": "2025-01-29T20:55:41.838964Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64518,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.847055Z",
"updated_at": "2025-01-29T20:55:41.847069Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64519,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.855357Z",
"updated_at": "2025-01-29T20:55:41.855370Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64520,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.864399Z",
"updated_at": "2025-01-29T20:55:41.864443Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64521,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.872044Z",
"updated_at": "2025-01-29T20:55:41.872058Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64522,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.880346Z",
"updated_at": "2025-01-29T20:55:41.880359Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64523,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.888694Z",
"updated_at": "2025-01-29T20:55:41.888707Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64524,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.896917Z",
"updated_at": "2025-01-29T20:55:41.896930Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64525,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.905375Z",
"updated_at": "2025-01-29T20:55:41.905388Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64526,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.913708Z",
"updated_at": "2025-01-29T20:55:41.913722Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64527,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 45",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.922030Z",
"updated_at": "2025-01-29T20:55:41.922043Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64528,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.930378Z",
"updated_at": "2025-01-29T20:55:41.930392Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64529,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s45_bladder_1_20200129213259.raw",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.938766Z",
"updated_at": "2025-01-29T20:55:41.938781Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64530,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s45_bladder_1_20200129213259.raw",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.947077Z",
"updated_at": "2025-01-29T20:55:41.947092Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64531,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.955403Z",
"updated_at": "2025-01-29T20:55:41.955416Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64532,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.963840Z",
"updated_at": "2025-01-29T20:55:41.963859Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64533,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.972038Z",
"updated_at": "2025-01-29T20:55:41.972051Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64534,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.980428Z",
"updated_at": "2025-01-29T20:55:41.980441Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64535,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.988716Z",
"updated_at": "2025-01-29T20:55:41.988730Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64536,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:41.997086Z",
"updated_at": "2025-01-29T20:55:41.997100Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64537,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:42.005410Z",
"updated_at": "2025-01-29T20:55:42.005423Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64538,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:42.013744Z",
"updated_at": "2025-01-29T20:55:42.013757Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64539,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:42.022086Z",
"updated_at": "2025-01-29T20:55:42.022100Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64540,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:42.030302Z",
"updated_at": "2025-01-29T20:55:42.030315Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64541,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "bladder",
"analysis_group": 2,
"source_file": 2090,
"created_at": "2025-01-29T20:55:42.038782Z",
"updated_at": "2025-01-29T20:55:42.038796Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2089,
"name": "s44_cervix_2.raw",
"description": "s44_cervix_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:41.487850Z",
"updated_at": "2025-01-29T20:55:41.487865Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64488,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 44",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.497142Z",
"updated_at": "2025-01-29T20:55:41.497161Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64489,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.505248Z",
"updated_at": "2025-01-29T20:55:41.505261Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64490,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "cervix",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.513626Z",
"updated_at": "2025-01-29T20:55:41.513638Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64491,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.521893Z",
"updated_at": "2025-01-29T20:55:41.521906Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64492,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.530273Z",
"updated_at": "2025-01-29T20:55:41.530285Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64493,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.539257Z",
"updated_at": "2025-01-29T20:55:41.539293Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64494,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.547144Z",
"updated_at": "2025-01-29T20:55:41.547162Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64495,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.555275Z",
"updated_at": "2025-01-29T20:55:41.555287Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64496,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.563577Z",
"updated_at": "2025-01-29T20:55:41.563590Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64497,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.571952Z",
"updated_at": "2025-01-29T20:55:41.571965Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64498,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.580318Z",
"updated_at": "2025-01-29T20:55:41.580329Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64499,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.588676Z",
"updated_at": "2025-01-29T20:55:41.588689Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64500,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 44",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.596883Z",
"updated_at": "2025-01-29T20:55:41.596895Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64501,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.605339Z",
"updated_at": "2025-01-29T20:55:41.605352Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64502,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s44_cervix_2.raw",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.613680Z",
"updated_at": "2025-01-29T20:55:41.613694Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64503,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s44_cervix_2.raw",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.621972Z",
"updated_at": "2025-01-29T20:55:41.621986Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64504,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.630326Z",
"updated_at": "2025-01-29T20:55:41.630339Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64505,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.638668Z",
"updated_at": "2025-01-29T20:55:41.638682Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64506,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.646997Z",
"updated_at": "2025-01-29T20:55:41.647009Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64507,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.655332Z",
"updated_at": "2025-01-29T20:55:41.655345Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64508,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.663545Z",
"updated_at": "2025-01-29T20:55:41.663559Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64509,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.671979Z",
"updated_at": "2025-01-29T20:55:41.671992Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64510,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.680318Z",
"updated_at": "2025-01-29T20:55:41.680330Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64511,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.688693Z",
"updated_at": "2025-01-29T20:55:41.688706Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64512,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.696918Z",
"updated_at": "2025-01-29T20:55:41.696932Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64513,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.705334Z",
"updated_at": "2025-01-29T20:55:41.705347Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64514,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "cervix",
"analysis_group": 2,
"source_file": 2089,
"created_at": "2025-01-29T20:55:41.713719Z",
"updated_at": "2025-01-29T20:55:41.713734Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2088,
"name": "s43_cervix_1.raw",
"description": "s43_cervix_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:41.173505Z",
"updated_at": "2025-01-29T20:55:41.173521Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64461,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 43",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.244637Z",
"updated_at": "2025-01-29T20:55:41.244679Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64462,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.255454Z",
"updated_at": "2025-01-29T20:55:41.255476Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64463,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "cervix",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.263280Z",
"updated_at": "2025-01-29T20:55:41.263289Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64464,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.271805Z",
"updated_at": "2025-01-29T20:55:41.271818Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64465,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.280178Z",
"updated_at": "2025-01-29T20:55:41.280192Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64466,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.288542Z",
"updated_at": "2025-01-29T20:55:41.288556Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64467,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.296825Z",
"updated_at": "2025-01-29T20:55:41.296838Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64468,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.305143Z",
"updated_at": "2025-01-29T20:55:41.305156Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64469,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.313600Z",
"updated_at": "2025-01-29T20:55:41.313615Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64470,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.321896Z",
"updated_at": "2025-01-29T20:55:41.321911Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64471,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.330210Z",
"updated_at": "2025-01-29T20:55:41.330224Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64472,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.338563Z",
"updated_at": "2025-01-29T20:55:41.338577Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64473,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 43",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.346886Z",
"updated_at": "2025-01-29T20:55:41.346900Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64474,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.355233Z",
"updated_at": "2025-01-29T20:55:41.355246Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64475,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s43_cervix_1.raw",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.363411Z",
"updated_at": "2025-01-29T20:55:41.363422Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64476,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s43_cervix_1.raw",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.371824Z",
"updated_at": "2025-01-29T20:55:41.371837Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64477,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.380221Z",
"updated_at": "2025-01-29T20:55:41.380234Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64478,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.388584Z",
"updated_at": "2025-01-29T20:55:41.388598Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64479,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.396887Z",
"updated_at": "2025-01-29T20:55:41.396901Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64480,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.405198Z",
"updated_at": "2025-01-29T20:55:41.405211Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64481,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.413580Z",
"updated_at": "2025-01-29T20:55:41.413595Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64482,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.421891Z",
"updated_at": "2025-01-29T20:55:41.421906Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64483,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.430217Z",
"updated_at": "2025-01-29T20:55:41.430230Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64484,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.438805Z",
"updated_at": "2025-01-29T20:55:41.438824Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64485,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.446964Z",
"updated_at": "2025-01-29T20:55:41.446979Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64486,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.455272Z",
"updated_at": "2025-01-29T20:55:41.455285Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64487,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "cervix",
"analysis_group": 2,
"source_file": 2088,
"created_at": "2025-01-29T20:55:41.464255Z",
"updated_at": "2025-01-29T20:55:41.464295Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2087,
"name": "s42_kidney_2.raw",
"description": "s42_kidney_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:40.921061Z",
"updated_at": "2025-01-29T20:55:40.921073Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64434,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 42",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:40.930355Z",
"updated_at": "2025-01-29T20:55:40.930375Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64435,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:40.938663Z",
"updated_at": "2025-01-29T20:55:40.938682Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64436,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "kidney",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:40.946769Z",
"updated_at": "2025-01-29T20:55:40.946784Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64437,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:40.955026Z",
"updated_at": "2025-01-29T20:55:40.955038Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64438,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:40.963434Z",
"updated_at": "2025-01-29T20:55:40.963447Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64439,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:40.971814Z",
"updated_at": "2025-01-29T20:55:40.971828Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64440,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:40.980149Z",
"updated_at": "2025-01-29T20:55:40.980162Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64441,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:40.988490Z",
"updated_at": "2025-01-29T20:55:40.988504Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64442,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:40.996799Z",
"updated_at": "2025-01-29T20:55:40.996813Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64443,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.005140Z",
"updated_at": "2025-01-29T20:55:41.005153Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64444,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.013458Z",
"updated_at": "2025-01-29T20:55:41.013471Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64445,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.021805Z",
"updated_at": "2025-01-29T20:55:41.021820Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64446,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 42",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.030132Z",
"updated_at": "2025-01-29T20:55:41.030146Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64447,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.038481Z",
"updated_at": "2025-01-29T20:55:41.038494Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64448,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s42_kidney_2.raw",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.046812Z",
"updated_at": "2025-01-29T20:55:41.046825Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64449,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s42_kidney_2.raw",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.055130Z",
"updated_at": "2025-01-29T20:55:41.055144Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64450,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.063477Z",
"updated_at": "2025-01-29T20:55:41.063490Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64451,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.071828Z",
"updated_at": "2025-01-29T20:55:41.071842Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64452,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.080142Z",
"updated_at": "2025-01-29T20:55:41.080155Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64453,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.088504Z",
"updated_at": "2025-01-29T20:55:41.088517Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64454,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.096777Z",
"updated_at": "2025-01-29T20:55:41.096791Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64455,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.105145Z",
"updated_at": "2025-01-29T20:55:41.105158Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64456,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.113436Z",
"updated_at": "2025-01-29T20:55:41.113449Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64457,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.121857Z",
"updated_at": "2025-01-29T20:55:41.121871Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64458,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.130202Z",
"updated_at": "2025-01-29T20:55:41.130215Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64459,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.138511Z",
"updated_at": "2025-01-29T20:55:41.138524Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64460,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "kidney",
"analysis_group": 2,
"source_file": 2087,
"created_at": "2025-01-29T20:55:41.146855Z",
"updated_at": "2025-01-29T20:55:41.146868Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2086,
"name": "s41_kidney_1.raw",
"description": "s41_kidney_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:40.671077Z",
"updated_at": "2025-01-29T20:55:40.671091Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64407,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 41",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.680208Z",
"updated_at": "2025-01-29T20:55:40.680226Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64408,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.688389Z",
"updated_at": "2025-01-29T20:55:40.688404Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64409,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "kidney",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.696633Z",
"updated_at": "2025-01-29T20:55:40.696646Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64410,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.705056Z",
"updated_at": "2025-01-29T20:55:40.705073Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64411,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.713358Z",
"updated_at": "2025-01-29T20:55:40.713371Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64412,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.721698Z",
"updated_at": "2025-01-29T20:55:40.721712Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64413,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.730033Z",
"updated_at": "2025-01-29T20:55:40.730046Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64414,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.738361Z",
"updated_at": "2025-01-29T20:55:40.738374Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64415,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.746692Z",
"updated_at": "2025-01-29T20:55:40.746706Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64416,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.754997Z",
"updated_at": "2025-01-29T20:55:40.755010Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64417,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.763280Z",
"updated_at": "2025-01-29T20:55:40.763294Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64418,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.771688Z",
"updated_at": "2025-01-29T20:55:40.771702Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64419,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 41",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.780027Z",
"updated_at": "2025-01-29T20:55:40.780040Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64420,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.788264Z",
"updated_at": "2025-01-29T20:55:40.788279Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64421,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s41_kidney_1.raw",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.796805Z",
"updated_at": "2025-01-29T20:55:40.796821Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64422,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s41_kidney_1.raw",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.805000Z",
"updated_at": "2025-01-29T20:55:40.805014Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64423,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.813438Z",
"updated_at": "2025-01-29T20:55:40.813453Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64424,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.821771Z",
"updated_at": "2025-01-29T20:55:40.821785Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64425,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.830048Z",
"updated_at": "2025-01-29T20:55:40.830060Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64426,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.838455Z",
"updated_at": "2025-01-29T20:55:40.838469Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64427,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.846619Z",
"updated_at": "2025-01-29T20:55:40.846631Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64428,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.854980Z",
"updated_at": "2025-01-29T20:55:40.854992Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64429,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.863441Z",
"updated_at": "2025-01-29T20:55:40.863455Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64430,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.871778Z",
"updated_at": "2025-01-29T20:55:40.871791Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64431,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.879996Z",
"updated_at": "2025-01-29T20:55:40.880009Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64432,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.888471Z",
"updated_at": "2025-01-29T20:55:40.888484Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64433,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "kidney",
"analysis_group": 2,
"source_file": 2086,
"created_at": "2025-01-29T20:55:40.896728Z",
"updated_at": "2025-01-29T20:55:40.896742Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2085,
"name": "s40_trachea_2.raw",
"description": "s40_trachea_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:40.329004Z",
"updated_at": "2025-01-29T20:55:40.329016Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64380,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 40",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.338339Z",
"updated_at": "2025-01-29T20:55:40.338353Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64381,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.346658Z",
"updated_at": "2025-01-29T20:55:40.346673Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64382,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "trachea",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.355081Z",
"updated_at": "2025-01-29T20:55:40.355101Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64383,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.363337Z",
"updated_at": "2025-01-29T20:55:40.363353Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64384,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.379027Z",
"updated_at": "2025-01-29T20:55:40.379042Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64385,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.401962Z",
"updated_at": "2025-01-29T20:55:40.401984Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64386,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.410112Z",
"updated_at": "2025-01-29T20:55:40.410126Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64387,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.418410Z",
"updated_at": "2025-01-29T20:55:40.418424Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64388,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.426618Z",
"updated_at": "2025-01-29T20:55:40.426631Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64389,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.435097Z",
"updated_at": "2025-01-29T20:55:40.435110Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64390,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.443327Z",
"updated_at": "2025-01-29T20:55:40.443340Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64391,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.451743Z",
"updated_at": "2025-01-29T20:55:40.451757Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64392,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 40",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.460082Z",
"updated_at": "2025-01-29T20:55:40.460096Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64393,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.468491Z",
"updated_at": "2025-01-29T20:55:40.468505Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64394,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s40_trachea_2.raw",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.476807Z",
"updated_at": "2025-01-29T20:55:40.476820Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64395,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s40_trachea_2.raw",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.485159Z",
"updated_at": "2025-01-29T20:55:40.485174Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64396,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.493475Z",
"updated_at": "2025-01-29T20:55:40.493491Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64397,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.501746Z",
"updated_at": "2025-01-29T20:55:40.501768Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64398,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.510047Z",
"updated_at": "2025-01-29T20:55:40.510061Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64399,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.589286Z",
"updated_at": "2025-01-29T20:55:40.589329Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64400,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.596707Z",
"updated_at": "2025-01-29T20:55:40.596720Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64401,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.605001Z",
"updated_at": "2025-01-29T20:55:40.605014Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64402,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.613592Z",
"updated_at": "2025-01-29T20:55:40.613614Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64403,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.621689Z",
"updated_at": "2025-01-29T20:55:40.621705Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64404,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.630027Z",
"updated_at": "2025-01-29T20:55:40.630042Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64405,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.638347Z",
"updated_at": "2025-01-29T20:55:40.638359Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64406,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "trachea",
"analysis_group": 2,
"source_file": 2085,
"created_at": "2025-01-29T20:55:40.646702Z",
"updated_at": "2025-01-29T20:55:40.646716Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2084,
"name": "s39_trachea_1.raw",
"description": "s39_trachea_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:40.079455Z",
"updated_at": "2025-01-29T20:55:40.079470Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64353,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 39",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.088250Z",
"updated_at": "2025-01-29T20:55:40.088265Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64354,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.096436Z",
"updated_at": "2025-01-29T20:55:40.096450Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64355,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "trachea",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.104959Z",
"updated_at": "2025-01-29T20:55:40.104972Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64356,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.113182Z",
"updated_at": "2025-01-29T20:55:40.113195Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64357,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.121570Z",
"updated_at": "2025-01-29T20:55:40.121583Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64358,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.129896Z",
"updated_at": "2025-01-29T20:55:40.129910Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64359,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.138229Z",
"updated_at": "2025-01-29T20:55:40.138242Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64360,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.146556Z",
"updated_at": "2025-01-29T20:55:40.146569Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64361,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.154957Z",
"updated_at": "2025-01-29T20:55:40.154971Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64362,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.163264Z",
"updated_at": "2025-01-29T20:55:40.163277Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64363,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.171615Z",
"updated_at": "2025-01-29T20:55:40.171628Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64364,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.179936Z",
"updated_at": "2025-01-29T20:55:40.179949Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64365,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 39",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.188175Z",
"updated_at": "2025-01-29T20:55:40.188191Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64366,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.196649Z",
"updated_at": "2025-01-29T20:55:40.196663Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64367,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s39_trachea_1.raw",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.204945Z",
"updated_at": "2025-01-29T20:55:40.204959Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64368,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s39_trachea_1.raw",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.213377Z",
"updated_at": "2025-01-29T20:55:40.213395Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64369,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.221611Z",
"updated_at": "2025-01-29T20:55:40.221625Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64370,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.229944Z",
"updated_at": "2025-01-29T20:55:40.229957Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64371,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.238504Z",
"updated_at": "2025-01-29T20:55:40.238523Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64372,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.246606Z",
"updated_at": "2025-01-29T20:55:40.246619Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64373,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.254748Z",
"updated_at": "2025-01-29T20:55:40.254759Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64374,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.263258Z",
"updated_at": "2025-01-29T20:55:40.263272Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64375,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.271619Z",
"updated_at": "2025-01-29T20:55:40.271632Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64376,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.279973Z",
"updated_at": "2025-01-29T20:55:40.279988Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64377,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.288351Z",
"updated_at": "2025-01-29T20:55:40.288381Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64378,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.296558Z",
"updated_at": "2025-01-29T20:55:40.296570Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64379,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "trachea",
"analysis_group": 2,
"source_file": 2084,
"created_at": "2025-01-29T20:55:40.304986Z",
"updated_at": "2025-01-29T20:55:40.305001Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2083,
"name": "s38_smallintestine_2.raw",
"description": "s38_smallintestine_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:39.829256Z",
"updated_at": "2025-01-29T20:55:39.829269Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64326,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 38",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.838204Z",
"updated_at": "2025-01-29T20:55:39.838220Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64327,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.846488Z",
"updated_at": "2025-01-29T20:55:39.846502Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64328,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "small intestine",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.854812Z",
"updated_at": "2025-01-29T20:55:39.854824Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64329,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.863185Z",
"updated_at": "2025-01-29T20:55:39.863199Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64330,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.871530Z",
"updated_at": "2025-01-29T20:55:39.871543Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64331,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.879870Z",
"updated_at": "2025-01-29T20:55:39.879883Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64332,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.888211Z",
"updated_at": "2025-01-29T20:55:39.888225Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64333,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.896458Z",
"updated_at": "2025-01-29T20:55:39.896472Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64334,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.904927Z",
"updated_at": "2025-01-29T20:55:39.904943Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64335,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.913178Z",
"updated_at": "2025-01-29T20:55:39.913192Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64336,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.921540Z",
"updated_at": "2025-01-29T20:55:39.921554Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64337,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.929856Z",
"updated_at": "2025-01-29T20:55:39.929870Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64338,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 38",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.938187Z",
"updated_at": "2025-01-29T20:55:39.938200Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64339,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.946528Z",
"updated_at": "2025-01-29T20:55:39.946542Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64340,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s38_smallintestine_2.raw",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.954875Z",
"updated_at": "2025-01-29T20:55:39.954889Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64341,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s38_smallintestine_2.raw",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.963197Z",
"updated_at": "2025-01-29T20:55:39.963211Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64342,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.971531Z",
"updated_at": "2025-01-29T20:55:39.971544Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64343,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.979866Z",
"updated_at": "2025-01-29T20:55:39.979880Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64344,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.988198Z",
"updated_at": "2025-01-29T20:55:39.988212Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64345,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:39.996552Z",
"updated_at": "2025-01-29T20:55:39.996566Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64346,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:40.005006Z",
"updated_at": "2025-01-29T20:55:40.005021Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64347,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:40.013214Z",
"updated_at": "2025-01-29T20:55:40.013228Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64348,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:40.021573Z",
"updated_at": "2025-01-29T20:55:40.021586Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64349,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:40.029911Z",
"updated_at": "2025-01-29T20:55:40.029925Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64350,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:40.038264Z",
"updated_at": "2025-01-29T20:55:40.038278Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64351,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:40.046559Z",
"updated_at": "2025-01-29T20:55:40.046572Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64352,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "small intestine",
"analysis_group": 2,
"source_file": 2083,
"created_at": "2025-01-29T20:55:40.054908Z",
"updated_at": "2025-01-29T20:55:40.054922Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2082,
"name": "s37_smallintestine_1.raw",
"description": "s37_smallintestine_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:39.579053Z",
"updated_at": "2025-01-29T20:55:39.579066Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64299,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 37",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.588169Z",
"updated_at": "2025-01-29T20:55:39.588184Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64300,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.596498Z",
"updated_at": "2025-01-29T20:55:39.596511Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64301,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "small intestine",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.604773Z",
"updated_at": "2025-01-29T20:55:39.604787Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64302,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.613109Z",
"updated_at": "2025-01-29T20:55:39.613122Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64303,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.621437Z",
"updated_at": "2025-01-29T20:55:39.621449Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64304,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.629792Z",
"updated_at": "2025-01-29T20:55:39.629805Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64305,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.638113Z",
"updated_at": "2025-01-29T20:55:39.638127Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64306,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.646451Z",
"updated_at": "2025-01-29T20:55:39.646464Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64307,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.654781Z",
"updated_at": "2025-01-29T20:55:39.654794Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64308,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.663126Z",
"updated_at": "2025-01-29T20:55:39.663139Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64309,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.671445Z",
"updated_at": "2025-01-29T20:55:39.671459Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64310,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.679780Z",
"updated_at": "2025-01-29T20:55:39.679794Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64311,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 37",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.688107Z",
"updated_at": "2025-01-29T20:55:39.688119Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64312,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.696478Z",
"updated_at": "2025-01-29T20:55:39.696491Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64313,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s37_smallintestine_1.raw",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.704747Z",
"updated_at": "2025-01-29T20:55:39.704759Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64314,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s37_smallintestine_1.raw",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.713127Z",
"updated_at": "2025-01-29T20:55:39.713140Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64315,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.721508Z",
"updated_at": "2025-01-29T20:55:39.721521Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64316,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.729823Z",
"updated_at": "2025-01-29T20:55:39.729836Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64317,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.738155Z",
"updated_at": "2025-01-29T20:55:39.738167Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64318,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.746500Z",
"updated_at": "2025-01-29T20:55:39.746513Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64319,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.754825Z",
"updated_at": "2025-01-29T20:55:39.754839Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64320,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.763172Z",
"updated_at": "2025-01-29T20:55:39.763186Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64321,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.771491Z",
"updated_at": "2025-01-29T20:55:39.771504Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64322,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.779850Z",
"updated_at": "2025-01-29T20:55:39.779864Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64323,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.788194Z",
"updated_at": "2025-01-29T20:55:39.788210Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64324,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.796529Z",
"updated_at": "2025-01-29T20:55:39.796541Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64325,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "small intestine",
"analysis_group": 2,
"source_file": 2082,
"created_at": "2025-01-29T20:55:39.804809Z",
"updated_at": "2025-01-29T20:55:39.804822Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2081,
"name": "s36_stomach_2.raw",
"description": "s36_stomach_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:39.139913Z",
"updated_at": "2025-01-29T20:55:39.139929Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64272,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 36",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.146195Z",
"updated_at": "2025-01-29T20:55:39.146207Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64273,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.154942Z",
"updated_at": "2025-01-29T20:55:39.154961Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64274,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "stomach",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.231235Z",
"updated_at": "2025-01-29T20:55:39.231269Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64275,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.297262Z",
"updated_at": "2025-01-29T20:55:39.297302Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64276,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.304745Z",
"updated_at": "2025-01-29T20:55:39.304758Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64277,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.312995Z",
"updated_at": "2025-01-29T20:55:39.313009Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64278,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.321377Z",
"updated_at": "2025-01-29T20:55:39.321390Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64279,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.329702Z",
"updated_at": "2025-01-29T20:55:39.329714Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64280,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.338044Z",
"updated_at": "2025-01-29T20:55:39.338056Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64281,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.346393Z",
"updated_at": "2025-01-29T20:55:39.346410Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64282,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.354690Z",
"updated_at": "2025-01-29T20:55:39.354703Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64283,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.363071Z",
"updated_at": "2025-01-29T20:55:39.363084Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64284,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 36",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.371415Z",
"updated_at": "2025-01-29T20:55:39.371427Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64285,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.379742Z",
"updated_at": "2025-01-29T20:55:39.379755Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64286,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s36_stomach_2.raw",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.388087Z",
"updated_at": "2025-01-29T20:55:39.388100Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64287,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s36_stomach_2.raw",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.396425Z",
"updated_at": "2025-01-29T20:55:39.396438Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64288,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.404720Z",
"updated_at": "2025-01-29T20:55:39.404733Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64289,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.413023Z",
"updated_at": "2025-01-29T20:55:39.413036Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64290,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.421416Z",
"updated_at": "2025-01-29T20:55:39.421429Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64291,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.494035Z",
"updated_at": "2025-01-29T20:55:39.494077Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64292,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.505153Z",
"updated_at": "2025-01-29T20:55:39.505178Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64293,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.513042Z",
"updated_at": "2025-01-29T20:55:39.513056Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64294,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.521428Z",
"updated_at": "2025-01-29T20:55:39.521441Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64295,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.529751Z",
"updated_at": "2025-01-29T20:55:39.529764Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64296,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.538079Z",
"updated_at": "2025-01-29T20:55:39.538093Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64297,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.546410Z",
"updated_at": "2025-01-29T20:55:39.546423Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64298,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "stomach",
"analysis_group": 2,
"source_file": 2081,
"created_at": "2025-01-29T20:55:39.554732Z",
"updated_at": "2025-01-29T20:55:39.554746Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2080,
"name": "s35_stomach_1.raw",
"description": "s35_stomach_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:38.885165Z",
"updated_at": "2025-01-29T20:55:38.885185Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64245,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 35",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.893193Z",
"updated_at": "2025-01-29T20:55:38.893212Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64246,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.901371Z",
"updated_at": "2025-01-29T20:55:38.901385Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64247,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "stomach",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.909735Z",
"updated_at": "2025-01-29T20:55:38.909749Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64248,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.918101Z",
"updated_at": "2025-01-29T20:55:38.918115Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64249,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.926397Z",
"updated_at": "2025-01-29T20:55:38.926411Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64250,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.934735Z",
"updated_at": "2025-01-29T20:55:38.934750Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64251,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.943233Z",
"updated_at": "2025-01-29T20:55:38.943253Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64252,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.951301Z",
"updated_at": "2025-01-29T20:55:38.951314Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64253,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.960413Z",
"updated_at": "2025-01-29T20:55:38.960460Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64254,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.971909Z",
"updated_at": "2025-01-29T20:55:38.971953Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64255,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.979668Z",
"updated_at": "2025-01-29T20:55:38.979681Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64256,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.987993Z",
"updated_at": "2025-01-29T20:55:38.988007Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64257,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 35",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:38.996322Z",
"updated_at": "2025-01-29T20:55:38.996336Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64258,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.004728Z",
"updated_at": "2025-01-29T20:55:39.004743Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64259,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s35_stomach_1.raw",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.012958Z",
"updated_at": "2025-01-29T20:55:39.012971Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64260,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s35_stomach_1.raw",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.021333Z",
"updated_at": "2025-01-29T20:55:39.021347Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64261,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.029663Z",
"updated_at": "2025-01-29T20:55:39.029677Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64262,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.038003Z",
"updated_at": "2025-01-29T20:55:39.038017Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64263,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.046232Z",
"updated_at": "2025-01-29T20:55:39.046245Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64264,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.054659Z",
"updated_at": "2025-01-29T20:55:39.054672Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64265,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.062990Z",
"updated_at": "2025-01-29T20:55:39.063003Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64266,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.071337Z",
"updated_at": "2025-01-29T20:55:39.071350Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64267,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.079699Z",
"updated_at": "2025-01-29T20:55:39.079713Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64268,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.088049Z",
"updated_at": "2025-01-29T20:55:39.088063Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64269,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.096424Z",
"updated_at": "2025-01-29T20:55:39.096447Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64270,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.104658Z",
"updated_at": "2025-01-29T20:55:39.104675Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64271,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "stomach",
"analysis_group": 2,
"source_file": 2080,
"created_at": "2025-01-29T20:55:39.113009Z",
"updated_at": "2025-01-29T20:55:39.113021Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2079,
"name": "s34_esophagus_2.raw",
"description": "s34_esophagus_2.raw",
"file": null,
"created_at": "2025-01-29T20:55:38.554133Z",
"updated_at": "2025-01-29T20:55:38.554146Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64218,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 34",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.562899Z",
"updated_at": "2025-01-29T20:55:38.562912Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64219,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.571252Z",
"updated_at": "2025-01-29T20:55:38.571266Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64220,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "esophagus",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.579478Z",
"updated_at": "2025-01-29T20:55:38.579491Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64221,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.587911Z",
"updated_at": "2025-01-29T20:55:38.587924Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64222,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.596241Z",
"updated_at": "2025-01-29T20:55:38.596254Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64223,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.604595Z",
"updated_at": "2025-01-29T20:55:38.604609Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64224,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.612921Z",
"updated_at": "2025-01-29T20:55:38.612934Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64225,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.621232Z",
"updated_at": "2025-01-29T20:55:38.621245Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64226,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.629568Z",
"updated_at": "2025-01-29T20:55:38.629581Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64227,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.637912Z",
"updated_at": "2025-01-29T20:55:38.637925Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64228,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "2",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.646142Z",
"updated_at": "2025-01-29T20:55:38.646155Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64229,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.654597Z",
"updated_at": "2025-01-29T20:55:38.654610Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64230,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 34",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.735203Z",
"updated_at": "2025-01-29T20:55:38.735244Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64231,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.746410Z",
"updated_at": "2025-01-29T20:55:38.746431Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64232,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s34_esophagus_2.raw",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.754597Z",
"updated_at": "2025-01-29T20:55:38.754611Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64233,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s34_esophagus_2.raw",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.762926Z",
"updated_at": "2025-01-29T20:55:38.762939Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64234,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.771249Z",
"updated_at": "2025-01-29T20:55:38.771262Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64235,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.779621Z",
"updated_at": "2025-01-29T20:55:38.779635Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64236,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.787950Z",
"updated_at": "2025-01-29T20:55:38.787963Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64237,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.796298Z",
"updated_at": "2025-01-29T20:55:38.796311Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64238,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.804639Z",
"updated_at": "2025-01-29T20:55:38.804655Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64239,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.812917Z",
"updated_at": "2025-01-29T20:55:38.812929Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64240,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.821296Z",
"updated_at": "2025-01-29T20:55:38.821310Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64241,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.829619Z",
"updated_at": "2025-01-29T20:55:38.829633Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64242,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.837934Z",
"updated_at": "2025-01-29T20:55:38.837948Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64243,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.846141Z",
"updated_at": "2025-01-29T20:55:38.846153Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64244,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "esophagus",
"analysis_group": 2,
"source_file": 2079,
"created_at": "2025-01-29T20:55:38.854647Z",
"updated_at": "2025-01-29T20:55:38.854660Z",
"not_applicable": false,
"mandatory": false
}
]
},
{
"id": 2078,
"name": "s33_esophagus_1.raw",
"description": "s33_esophagus_1.raw",
"file": null,
"created_at": "2025-01-29T20:55:38.235207Z",
"updated_at": "2025-01-29T20:55:38.235228Z",
"user": 2,
"analysis_group": 2,
"metadata_columns": [
{
"id": 64191,
"name": "Source name",
"type": "",
"column_position": 0,
"value": "sample 33",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.242828Z",
"updated_at": "2025-01-29T20:55:38.242841Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64192,
"name": "Organism",
"type": "Characteristics",
"column_position": 1,
"value": "homo sapiens",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.251333Z",
"updated_at": "2025-01-29T20:55:38.251353Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64193,
"name": "Organism part",
"type": "Characteristics",
"column_position": 2,
"value": "esophagus",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.259675Z",
"updated_at": "2025-01-29T20:55:38.259689Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64194,
"name": "Cell type",
"type": "Characteristics",
"column_position": 3,
"value": null,
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.267996Z",
"updated_at": "2025-01-29T20:55:38.268012Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64195,
"name": "Cell line",
"type": "Characteristics",
"column_position": 4,
"value": null,
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.276343Z",
"updated_at": "2025-01-29T20:55:38.276355Z",
"not_applicable": true,
"mandatory": false
},
{
"id": 64196,
"name": "Developmental stage",
"type": "Characteristics",
"column_position": 5,
"value": "adult",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.284651Z",
"updated_at": "2025-01-29T20:55:38.284664Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64197,
"name": "Disease",
"type": "Characteristics",
"column_position": 6,
"value": "none",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.292975Z",
"updated_at": "2025-01-29T20:55:38.292989Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64198,
"name": "Ancestry category",
"type": "Characteristics",
"column_position": 7,
"value": null,
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.301202Z",
"updated_at": "2025-01-29T20:55:38.301215Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64199,
"name": "Sex",
"type": "Characteristics",
"column_position": 8,
"value": null,
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.309658Z",
"updated_at": "2025-01-29T20:55:38.309673Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64200,
"name": "Age",
"type": "Characteristics",
"column_position": 9,
"value": null,
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.317959Z",
"updated_at": "2025-01-29T20:55:38.317972Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64201,
"name": "Biological replicate",
"type": "Characteristics",
"column_position": 10,
"value": "1",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.326307Z",
"updated_at": "2025-01-29T20:55:38.326321Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64202,
"name": "Material type",
"type": "",
"column_position": 11,
"value": "tissue",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.334636Z",
"updated_at": "2025-01-29T20:55:38.334651Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64203,
"name": "Assay name",
"type": "",
"column_position": 12,
"value": "run 33",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.342900Z",
"updated_at": "2025-01-29T20:55:38.342913Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64204,
"name": "Technology type",
"type": "",
"column_position": 13,
"value": "proteomic profiling by mass spectrometry",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.351250Z",
"updated_at": "2025-01-29T20:55:38.351266Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64205,
"name": "Data file",
"type": "Comment",
"column_position": 14,
"value": "s33_esophagus_1.raw",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.359671Z",
"updated_at": "2025-01-29T20:55:38.359684Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64206,
"name": "File uri",
"type": "Comment",
"column_position": 15,
"value": "https://ftp.ebi.ac.uk/pride-archive/2020/10/pxd020192/s33_esophagus_1.raw",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.367996Z",
"updated_at": "2025-01-29T20:55:38.368010Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64207,
"name": "Technical replicate",
"type": "Comment",
"column_position": 16,
"value": "1",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.376310Z",
"updated_at": "2025-01-29T20:55:38.376323Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64208,
"name": "Fraction identifier",
"type": "Comment",
"column_position": 17,
"value": "1",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.384625Z",
"updated_at": "2025-01-29T20:55:38.384637Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64209,
"name": "Label",
"type": "Comment",
"column_position": 18,
"value": "ac=ms:1002038;nt=label free sample",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.392980Z",
"updated_at": "2025-01-29T20:55:38.392994Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64210,
"name": "Cleavage agent details",
"type": "Comment",
"column_position": 19,
"value": "nt=trypsin; ac=ms:1001251",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.401326Z",
"updated_at": "2025-01-29T20:55:38.401341Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64211,
"name": "Instrument",
"type": "Comment",
"column_position": 20,
"value": "nt=q exactive hf-x;ac=ms:1002877",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.409650Z",
"updated_at": "2025-01-29T20:55:38.409662Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64212,
"name": "Modification parameters",
"type": "Comment",
"column_position": 21,
"value": "nt=carbamidomethyl;ta=c;mt=fixed;ac=unimod:4",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.485444Z",
"updated_at": "2025-01-29T20:55:38.485483Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64213,
"name": "Modification parameters",
"type": "Comment",
"column_position": 22,
"value": "nt=oxidation;mt=variable;ta=m;ac=unimod:35",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.496546Z",
"updated_at": "2025-01-29T20:55:38.496567Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64214,
"name": "Dissociation method",
"type": "Comment",
"column_position": 23,
"value": "ac=ms:1000422;nt=hcd",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.504575Z",
"updated_at": "2025-01-29T20:55:38.504588Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64215,
"name": "Precursor mass tolerance",
"type": "Comment",
"column_position": 24,
"value": "7 ppm",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.512891Z",
"updated_at": "2025-01-29T20:55:38.512904Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64216,
"name": "Fragment mass tolerance",
"type": "Comment",
"column_position": 25,
"value": "0.02 da",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.521217Z",
"updated_at": "2025-01-29T20:55:38.521230Z",
"not_applicable": false,
"mandatory": false
},
{
"id": 64217,
"name": "Organism part",
"type": "Factor value",
"column_position": 26,
"value": "esophagus",
"analysis_group": 2,
"source_file": 2078,
"created_at": "2025-01-29T20:55:38.529556Z",
"updated_at": "2025-01-29T20:55:38.529568Z",
"not_applicable": false,
"mandatory": false
}
]
}
]
}