{"count":543,"next":"https://cinder.proteo.info/api/subcellular_locations/?format=json&limit=20&offset=480&ordering=synonyms","previous":"https://cinder.proteo.info/api/subcellular_locations/?format=json&limit=20&offset=440&ordering=synonyms","results":[{"location_identifier":"Photoreceptor inner segment membrane.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0514","definition":"The membrane surrounding the inner segment of a vertebrate photoreceptor. SL Photoreceptor inner segment membrane. HI Membrane. HP Endomembrane system. HP . ","synonyms":null,"content":"Photoreceptor inner segment membrane.","is_a":"Membrane.; ","part_of":"Endomembrane system.; Photoreceptor inner segment.; ","keyword":null,"gene_ontology":null,"annotation":null,"references":null,"links":null},{"location_identifier":"Photoreceptor outer segment.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0458","definition":"The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes. ","synonyms":null,"content":"Cell projection, cilium, photoreceptor outer segment.","is_a":"Cilium.; ","part_of":null,"keyword":null,"gene_ontology":"GO:0001750; photoreceptor outer segment; ","annotation":null,"references":null,"links":null},{"location_identifier":"Organellar chromatophore.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0351","definition":"The organellar chromatophore is the photosynthetic inclusion found in Paulinella species, which are photosynthetic thecate amoeba. It probably derives from a different endosymbiotic event than that which led to all other plastids. Houses the machinery necessary for photosynthesis and CO(2) fixation and may also be able to make a few amino acids, some fatty acids and a few cofactors. They are surrounded by 2 membranes, between which is found a residual peptidoglycan wall, and contain thylakoids. ","synonyms":null,"content":"Plastid, organellar chromatophore.","is_a":"Plastid.; ","part_of":null,"keyword":"KW-0994","gene_ontology":"GO:0070111; organellar chromatophore; ","annotation":null,"references":null,"links":null},{"location_identifier":"Organellar chromatophore inner membrane.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0359","definition":"The organellar chromatophore inner membrane is the membrane which separates the chromatophore stroma from the intermembrane space. Found exclusively in Paulinella species, which are photosynthetic thecate amoeba. ","synonyms":null,"content":"Plastid, organellar chromatophore inner membrane.","is_a":"Plastid inner membrane.; Organellar chromatophore membrane.; ","part_of":"Organellar chromatophore.; ","keyword":null,"gene_ontology":"GO:0070113; organellar chromatophore inner membrane; ","annotation":null,"references":null,"links":null},{"location_identifier":"Organellar chromatophore intermembrane space.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0360","definition":"The intermembrane space between the inner and the outer organellar chromatophore membranes. Found exclusively in Paulinella species, which are photosynthetic thecate amoeba. ","synonyms":null,"content":"Plastid, organellar chromatophore intermembrane space.","is_a":"Plastid intermembrane space.; ","part_of":"Organellar chromatophore.; ","keyword":null,"gene_ontology":"GO:0070115; organellar chromatophore intermembrane space; ","annotation":null,"references":null,"links":null},{"location_identifier":"Organellar chromatophore membrane.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0352","definition":"One of the membranes of an organellar chromatophore. This term is used when it is not known with which membrane (outer membrane, inner membrane or thylakoid) a protein is associated. Found exclusively in Paulinella species, which are photosynthetic thecate amoeba. ","synonyms":null,"content":"Plastid, organellar chromatophore membrane.","is_a":"Plastid membrane.; ","part_of":"Organellar chromatophore.; ","keyword":null,"gene_ontology":"GO:0070112; organellar chromatophore membrane; ","annotation":null,"references":null,"links":null},{"location_identifier":"Organellar chromatophore outer membrane.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0361","definition":"The organellar chromatophore outer membrane is the organellar chromatophore membrane facing the cytoplasm. Found exclusively in Paulinella species, which are photosynthetic thecate amoeba. ","synonyms":null,"content":"Plastid, organellar chromatophore outer membrane.","is_a":"Plastid outer membrane.; Organellar chromatophore membrane.; ","part_of":"Organellar chromatophore.; ","keyword":null,"gene_ontology":"GO:0070114; organellar chromatophore outer membrane; ","annotation":null,"references":null,"links":null},{"location_identifier":"Organellar chromatophore thylakoid.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0354","definition":"The thylakoid of an organellar chromatophore is an internal system of interconnected membranes that carry the complexes for the light reactions of photosynthesis. Found exclusively in Paulinella species, which are photosynthetic thecate amoeba. ","synonyms":null,"content":"Plastid, organellar chromatophore thylakoid.","is_a":"Plastid thylakoid.; ","part_of":"Organellar chromatophore.; ","keyword":null,"gene_ontology":"GO:0070116; organellar chromatophore thylakoid; ","annotation":null,"references":null,"links":null},{"location_identifier":"Organellar chromatophore thylakoid lumen.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0355","definition":"The organellar chromatophore thylakoid lumen is the compartment bounded by the thylakoid membrane. Found exclusively in Paulinella species, which are photosynthetic thecate amoeba. ","synonyms":null,"content":"Plastid, organellar chromatophore thylakoid lumen.","is_a":"Plastid thylakoid lumen.; ","part_of":"Organellar chromatophore thylakoid.; ","keyword":null,"gene_ontology":"GO:0070117; organellar chromatophore thylakoid lumen; ","annotation":null,"references":null,"links":null},{"location_identifier":"Organellar chromatophore thylakoid membrane.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0356","definition":"The organellar chromatophore thylakoid membrane is an internal system of interconnected membranes that house the complexes which carry out the light reactions of photosynthesis. Found exclusively in Paulinella species, which are photosynthetic thecate amoeba. ","synonyms":null,"content":"Plastid, organellar chromatophore thylakoid membrane.","is_a":"Plastid thylakoid membrane.; ","part_of":"Organellar chromatophore thylakoid.; ","keyword":null,"gene_ontology":"GO:0070118; organellar chromatophore thylakoid membrane; ","annotation":null,"references":null,"links":null},{"location_identifier":"Photoreceptor outer segment membrane.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0513","definition":"The membrane surrounding the outer segment of a vertebrate photoreceptor. ","synonyms":null,"content":"Photoreceptor outer segment membrane.","is_a":"Membrane.; ","part_of":"Endomembrane system.; Photoreceptor outer segment.; ","keyword":null,"gene_ontology":null,"annotation":null,"references":null,"links":null},{"location_identifier":"Phragmoplast.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0207","definition":"The phragmoplast is a plant cell specific structure that forms during late cytokinesis. This complex assembly of microtubules, actin filaments and associated molecules acts as a framework for cell plate assembly and subsequent formation of the future cell wall separating the two daughter cells. ","synonyms":null,"content":"Cytoplasm, cytoskeleton, phragmoplast.","is_a":null,"part_of":"Cytoskeleton.; ","keyword":null,"gene_ontology":"GO:0009524; phragmoplast; ","annotation":null,"references":null,"links":null},{"location_identifier":"Rough endoplasmic reticulum lumen.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0236","definition":"The rough endoplasmic reticulum lumen is the area enclosed by the rough endoplasmic reticulum membrane. ","synonyms":null,"content":"Rough endoplasmic reticulum lumen.","is_a":"Endoplasmic reticulum lumen.; ","part_of":"Rough endoplasmic reticulum.; ","keyword":null,"gene_ontology":"GO:0048237; rough endoplasmic reticulum lumen; ","annotation":null,"references":null,"links":null},{"location_identifier":"Parasitophorous vacuole.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0194","definition":"The parasitophorous vacuole is a vacuole found in the host cells where most apicomplexan parasites reside and develop. During host cell invasion, the apicomplexan parasites initiate the formation of a membrane (the parasitophorous vacuolar membrane), which surrounds the intracellular parasite. ","synonyms":null,"content":"Parasitophorous vacuole.","is_a":null,"part_of":null,"keyword":null,"gene_ontology":"GO:0020003; symbiont-containing vacuole; ","annotation":null,"references":null,"links":null},{"location_identifier":"Peribacteroid membrane.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0195","definition":"Symbiosis leads to the formation of a new compartment in the plant cell when bacteria enter the plant cell by endocytosis, the symbiosome. This compartment harbours the bacteroids surrounded by a peribacteroid membrane (PMB) originating from the plant plasma membrane. The space between this membrane and the bacteroid membrane is called the peribacteroid space. ","synonyms":null,"content":"Symbiosome, peribacteroid membrane.","is_a":"Membrane.; ","part_of":"Endomembrane system.; Symbiosome.; ","keyword":null,"gene_ontology":"GO:0043661; peribacteroid membrane; ","annotation":null,"references":null,"links":null},{"location_identifier":"Peribacteroid space.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0196","definition":"Symbiosis lead to the formation of a new compartment in the plant cell when bacteria enter the plant cell by endocytosis. This compartment harbours the bacteroids surrounded by a peribacteroid membrane (PMB) originating from the plant plasma membrane. The space between this membrane and the bacteroid membrane is called the peribacteroid space. ","synonyms":null,"content":"Symbiosome, peribacteroid space.","is_a":null,"part_of":"Symbiosome.; ","keyword":null,"gene_ontology":"GO:0043662; peribacteroid fluid; ","annotation":null,"references":null,"links":null},{"location_identifier":"Perinuclear theca.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0199","definition":"The perinuclear theca is a cytoskeletal structure that covers the nucleus of mammalian spermatozoa except for a narrow zone around the insertion of the tail. It shows two distinct regions, a subacrosomal layer or perforatorium and, continuing caudally beyond the acrosomic system, the postacrosomal sheath. ","synonyms":null,"content":"Cytoplasm, cytoskeleton, perinuclear theca.","is_a":null,"part_of":"Cytoskeleton.; ","keyword":null,"gene_ontology":"GO:0033011; perinuclear theca; ","annotation":null,"references":null,"links":null},{"location_identifier":"Peroxisome.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0204","definition":"The peroxisome is a small eukaryotic organelle limited by a single membrane, specialized for carrying out oxidative reactions. Contains mainly peroxidases, several other oxidases and catalase. The catalase regulates the contents of the produced toxic hydrogen peroxide thus protecting the cell. Beta-oxidation of fatty acids is another major function of peroxisomes. In plants and fungi this degradation occurs only in this cellular compartment. ","synonyms":null,"content":"Peroxisome.","is_a":null,"part_of":null,"keyword":"KW-0576","gene_ontology":"GO:0005777; peroxisome; ","annotation":null,"references":null,"links":null},{"location_identifier":"Phagocytic cup.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0473","definition":"Cup-shaped invaginations of the cell membrane that subsequently close at their distal margins to form phagosomes during phagocytosis. By progression of its rim along the particle surface, this phagocytic cup envelops and eventually encloses the particle by separation of the phagosome membrane from the cell membrane. Filamentous actin accumulates between the outer and inner leaflet of the cup membrane and is most strongly enriched at the rim of the cup, the site of its protrusion. ","synonyms":null,"content":"Cell projection, phagocytic cup.","is_a":"Cell projection.; ","part_of":null,"keyword":null,"gene_ontology":"GO:0001891; phagocytic cup; ","annotation":null,"references":null,"links":null},{"location_identifier":"Plastid.","topology_identifier":null,"orientation_identifier":null,"accession":"SL-0209","definition":"The plastid is a semi-autonomous, self-reproducing organelle. Plastids are remnants of a photosynthetic organism that was engulfed by the host, although not all are now photosynthetic. Plastid genomes encode genes for rRNAs, tRNAs and between about 28 and 150 proteins. Plastids can be categorized in 4 main groups: chloroplasts, cyanelles, apicoplasts and non-photosynthetic. The latter are found is some land plants (Epifagus virginiana), chlorophyte algae (Prototheca wickerhamii) and euglenoids (Astasis longa), which do not encode the genes necessary for photosynthesis and so are not photosynthetic but still contain a plastid. Non-photosynthetic plastids probably do not contain thylakoids. ","synonyms":null,"content":"Plastid.","is_a":null,"part_of":null,"keyword":"KW-0934","gene_ontology":"GO:0009536; plastid; ","annotation":null,"references":null,"links":null}]}