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{
"count": 543,
"next": "https://cinder.proteo.info/api/subcellular_locations/?format=api&limit=20&offset=20",
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"results": [
{
"location_identifier": "Acidocalcisome.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0002",
"definition": "The acidocalcisome is an electron-dense acidic organelle which contains a matrix of pyrophosphate and polyphosphates with bound calcium and other cations. Its limiting membrane possesses a number of pumps and exchangers for the uptake and release of these elements. The acidocalcisome does not belong to the endocytic pathway and may represent a branch of the secretory pathway in trypanosomatids and apicomplexan parasites. The acidocalcisome is possibly involved in polyphosphate and cation storage and in adaptation of these microoganisms to environmental stress. ",
"synonyms": null,
"content": "Acidocalcisome.",
"is_a": null,
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0020022; acidocalcisome; ",
"annotation": null,
"references": "PubMed=15738951; DOI=10.1038/nrmicro1097;; ",
"links": null
},
{
"location_identifier": "Acidocalcisome membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0003",
"definition": "The membrane of an acidocalcisome. ",
"synonyms": "Acidocalcisomal membrane.; ",
"content": "Acidocalcisome membrane.",
"is_a": "Membrane.; ",
"part_of": "Acidocalcisome.; Endomembrane system.; ",
"keyword": null,
"gene_ontology": "GO:0033102; acidocalcisome membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Acrosome inner membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0004",
"definition": "The portion of the acrosomal membrane closely associated with the anterior region of the nuclear envelope. ",
"synonyms": "Acrosomal inner membrane; IAM; Inner acrosomal membrane.; ",
"content": "Cytoplasmic vesicle, secretory vesicle, acrosome inner membrane.",
"is_a": null,
"part_of": "Acrosome membrane.; ",
"keyword": null,
"gene_ontology": "GO:0002079; inner acrosomal membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Acrosome lumen.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0005",
"definition": "The lumen of the acrosome. ",
"synonyms": "Acrosomal lumen.; ",
"content": "Cytoplasmic vesicle, secretory vesicle, acrosome lumen.",
"is_a": "Secretory vesicle lumen.; ",
"part_of": "Acrosome.; ",
"keyword": null,
"gene_ontology": "GO:0043160; acrosomal lumen; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Acrosome membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0006",
"definition": "The membrane of the acrosome. ",
"synonyms": "Acrosomal membrane.; ",
"content": "Cytoplasmic vesicle, secretory vesicle, acrosome membrane.",
"is_a": "Secretory vesicle membrane.; ",
"part_of": "Acrosome.; Endomembrane system.; ",
"keyword": null,
"gene_ontology": "GO:0002080; acrosomal membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Acrosome.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0007",
"definition": "The acrosome is a large lysosome-like vesicle overlying the sperm nucleus. This spermatid specific organelle, derived from the Golgi during spermatogenesis, contains both unique acrosomal enzymes and common enzymes associated with lysosomes in somatic cells. Only sperm that have undergone the acrosome reaction can fuse with egg plasma membrane. The acrosome reaction is characterized by multiple fusions of the outer acrosomal membrane with the sperm cell membrane. ",
"synonyms": "Acrosomal vesicle.; ",
"content": "Cytoplasmic vesicle, secretory vesicle, acrosome.",
"is_a": "Secretory vesicle.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0001669; acrosomal vesicle; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Actin patch.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0008",
"definition": "The actin patch is a highly dynamic actin structure in fungi required primarily for endocytosis but possibly also coupled to exocytosis. Actin patches are highly motile, they first assemble at sites of polarized cell growth and then move slowly and nondirectionally along the cell cortex. ",
"synonyms": "Actin cortical patch.; ",
"content": "Cytoplasm, cytoskeleton, actin patch.",
"is_a": null,
"part_of": "Cytoskeleton.; ",
"keyword": null,
"gene_ontology": "GO:0030479; actin cortical patch; ",
"annotation": "The actin patch is a specialised structure which is specific to fungi so this term should be used only for fungal species. ",
"references": null,
"links": null
},
{
"location_identifier": "Adherens junction.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0009",
"definition": "The adherens junction is an adhesion complex that localizes close to the apical membrane in epithelial cells. These junctions join the actin cytoskeleton to the plasma membrane to form adhesive contacts between cells or between cells and extracellular matrix. AJs mediate both cell adhesion and signaling. ",
"synonyms": "AJ; ZA; Zonula adherens.; ",
"content": "Cell junction, adherens junction.",
"is_a": "Cell junction.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0005912; adherens junction; ",
"annotation": "Add \"Cell membrane\" if the protein is clearly associated with the membrane. ",
"references": null,
"links": null
},
{
"location_identifier": "Aleurone grain.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0010",
"definition": "The aleurone grain (protein body), is a specialized dry vacuole where storage proteins accumulate in a stable form in seeds, usually in the endosperm. Cells containing aleurones form the aleurone layer. These act as a source of amino acids for various synthetic activities during germination, but also represent immensely important nutritional sources for humans and ruminants. In most seeds, the aleuron grains contain three morphologically distinct regions: the matrix, crystalloid, and globoid. ",
"synonyms": "Protein body.; ",
"content": "Vacuole, aleurone grain.",
"is_a": "Vacuole.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0033095; aleurone grain; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Aleurone grain membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0011",
"definition": "The membrane of an aleurone grain. ",
"synonyms": "Protein body membrane.; ",
"content": "Vacuole, aleurone grain membrane.",
"is_a": "Vacuole membrane.; ",
"part_of": "Aleurone grain.; ",
"keyword": null,
"gene_ontology": "GO:0032578; aleurone grain membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Amyloplast.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0012",
"definition": "The amyloplast is a colorless plant plastid that forms and stores starch. Amyloplasts are found in many tissues, particularly in storage tissues. They are found in both photosynthetic and parasitic plants, i.e. even in plants that are not capable of photosynthesis. Many amyloplast proteins are also expressed in photosynthetic tissue. ",
"synonyms": null,
"content": "Plastid, amyloplast.",
"is_a": "Plastid.; ",
"part_of": null,
"keyword": "KW-0035",
"gene_ontology": "GO:0009501; amyloplast; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Amyloplast inner membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0013",
"definition": "The inner membrane of an amyloplast. ",
"synonyms": "Inner amyloplastic membrane.; ",
"content": "Plastid, amyloplast inner membrane.",
"is_a": "Amyloplast membrane.; Plastid inner membrane.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0033098; amyloplast inner membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Amyloplast membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0014",
"definition": "The membrane surrounding the amyloplast. Also used when it is not clear in which amyloplast membrane a protein is found. ",
"synonyms": null,
"content": "Plastid, amyloplast membrane.",
"is_a": "Plastid membrane.; ",
"part_of": "Amyloplast.; ",
"keyword": null,
"gene_ontology": "GO:0033097; amyloplast membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Apical cell membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0015",
"definition": "The fraction of the cell membrane at the apical end of the cell, which faces the outside world or the lumen of the cavity. ",
"synonyms": "Apical plasma membrane.; ",
"content": "Apical cell membrane.",
"is_a": null,
"part_of": "Cell membrane.; ",
"keyword": null,
"gene_ontology": "GO:0016324; apical plasma membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Apical lamina.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0016",
"definition": "In the sea urchin embryos the apical lamina is a fibrous meshwork that remains after removal of hyalin from the hyalin layer. ",
"synonyms": null,
"content": "Secreted, extracellular space, extracellular matrix, apical lamina.",
"is_a": "Extracellular matrix.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0032579; apical lamina of hyaline layer; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Apicolateral cell membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0017",
"definition": "The fraction of the cell membrane at the apical end of the lateral plasma membrane of the cell. ",
"synonyms": "Apicolateral plasma membrane.; ",
"content": "Apicolateral cell membrane.",
"is_a": null,
"part_of": "Cell membrane.; ",
"keyword": null,
"gene_ontology": "GO:0016327; apicolateral plasma membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Apicoplast.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0018",
"definition": "The apicoplast is a plastid found in some apicocomplexan parasites which is a non-photosynthetic plastid relict. Apicoplasts do not contain thylakoids; it is not yet clear if they contain internal membranes. ",
"synonyms": "Golgi-adjunct organelle; Thick-walled organelle.; ",
"content": "Plastid, apicoplast.",
"is_a": "Plastid.; ",
"part_of": null,
"keyword": "KW-0933",
"gene_ontology": "GO:0020011; apicoplast; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Apoplast.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0019",
"definition": "The apoplast is the \"non-living\" extracellular space that surrounds the symplast. It consists of cell walls and spaces between cells. Water and solutes can move freely in this framework, except at the endodermis in roots and stems where the apoplastic flow of ions is interrupted by the Casparian strip, forcing water to flow to symplast. ",
"synonyms": null,
"content": "Secreted, extracellular space, apoplast.",
"is_a": "Extracellular space.; ",
"part_of": null,
"keyword": "KW-0052",
"gene_ontology": "GO:0048046; apoplast; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Attachment organelle.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0020",
"definition": "The attachment organelle is a multifunctional polar structure found in several Mycoplasma species. This large and complex cell extension, whose predicted mass is greater than that of a vertebrate nuclear pore complex, is essential for adherence to host cells, is involved in gliding motility, and is associated with cell division. ",
"synonyms": "Terminal organelle.; ",
"content": "Cell projection, attachment organelle.",
"is_a": "Cell projection.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0033099; attachment organelle; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Attachment organelle membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0021",
"definition": "The membrane surrounding the attachment organelle. ",
"synonyms": "Terminal organelle membrane.; ",
"content": "Cell projection, attachment organelle membrane.",
"is_a": null,
"part_of": "Attachment organelle.; Cell membrane.; ",
"keyword": null,
"gene_ontology": "GO:0033111; attachment organelle membrane; ",
"annotation": null,
"references": null,
"links": null
}
]
}