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{
"count": 543,
"next": "https://cinder.proteo.info/api/subcellular_locations/?format=api&limit=20&offset=60",
"previous": "https://cinder.proteo.info/api/subcellular_locations/?format=api&limit=20&offset=20",
"results": [
{
"location_identifier": "Cellular chromatophore membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0042",
"definition": "The cellular chromatophore membrane is the plasma-membrane derived internal, photosynthetic membrane found in the cytoplasm in purple photosynthetic bacteria. They contain the reaction centers, antennae complexes, cytochrome bc1 complex and the F(0)F(1)-ATPase. ",
"synonyms": "Chromatophore membrane.; ",
"content": "Cellular chromatophore membrane.",
"is_a": "Membrane.; ",
"part_of": "Endomembrane system.; ",
"keyword": null,
"gene_ontology": "GO:0042717; plasma membrane-derived chromatophore membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Cellular thylakoid.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0043",
"definition": "A bacterial thylakoid membrane usually formed by extensive invaginations of the cell inner (plasma) membrane. In cyanobacteria thylakoids house the photosynthetic machinery and pigments. In Synechocystis sp. strain PCC 6803 the thylakoid membranes are physically discontinuous from the plasma membrane, and thus represent bona fide intracellular organelles. ",
"synonyms": "Bacterial thylakoid.; ",
"content": "Cellular thylakoid.",
"is_a": "Thylakoid.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0030075; bacterial thylakoid; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Cellular thylakoid lumen.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0044",
"definition": "The lumen of the cellular thylakoid. ",
"synonyms": null,
"content": "Cellular thylakoid lumen.",
"is_a": null,
"part_of": "Cellular thylakoid.; ",
"keyword": null,
"gene_ontology": "GO:0031979; plasma membrane-derived thylakoid lumen; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Cellular thylakoid membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0045",
"definition": "The membrane of the cellular thylakoid. ",
"synonyms": null,
"content": "Cellular thylakoid membrane.",
"is_a": "Membrane.; ",
"part_of": "Cellular thylakoid.; Endomembrane system.; ",
"keyword": null,
"gene_ontology": "GO:0031676; plasma membrane-derived thylakoid membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Centriole.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0046",
"definition": "The centriole is a barrel-shaped microtubule-based structure. A pair of centrioles, embedded in the so-called pericentriolar material, constitute the centrosome, a microtubule organizing center of an eukaryotic cell. Centrioles are barrel-shaped microtubule-based structures organized in a 9-fold radial symmetry. Centriolar microtubule arrays usually consist of triplet microtubules, although doublets or singlets are present in some species. Centrioles are structurally related to (and often interconvertible with) basal bodies, the organelles required for the assembly of a cilium or flagellum. ",
"synonyms": null,
"content": "Cytoplasm, cytoskeleton, microtubule organizing center, centrosome, centriole.",
"is_a": null,
"part_of": "Centrosome.; ",
"keyword": null,
"gene_ontology": "GO:0005814; centriole; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Centromere.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0047",
"definition": "The centromere is a region of replicated eukaryotic chromosomes where the two chromatids are joined together. ",
"synonyms": "Chromosome, pericentric region.; ",
"content": "Chromosome, centromere.",
"is_a": null,
"part_of": "Chromosome.; ",
"keyword": "KW-0137",
"gene_ontology": "GO:0000775; chromosome, centromeric region; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Centrosome.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0048",
"definition": "The centrosome is a microtubule organizing center (MTOC) responsible for the nucleation and organisation of microtubules. It is composed of two orthogonally arranged centrioles, each one having a barrel shaped microtubule structure, and their surrounding pericentriolar material (PCM). ",
"synonyms": null,
"content": "Cytoplasm, cytoskeleton, microtubule organizing center, centrosome.",
"is_a": null,
"part_of": "Microtubule organizing center.; ",
"keyword": null,
"gene_ontology": "GO:0005813; centrosome; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0049",
"definition": "The most common form of plastid, the chloroplast is a photosynthetic organelle found in all photosynthetic eukaryotes except glaucocystophyte algae (where it is called a cyanelle) and Paulinella species (where it is called an organellar chromatophore). In green (photosynthetic) tissue they house the machinery necessary for pigment biosynthesis, amino acid synthesis, lipid metabolism etc, as well as the machinery for photosynthesis and CO(2) fixation. They are surrounded by between 2 and 4 membranes and contain thylakoids in green tissue. ",
"synonyms": null,
"content": "Plastid, chloroplast.",
"is_a": "Plastid.; ",
"part_of": null,
"keyword": "KW-0150",
"gene_ontology": "GO:0009507; chloroplast; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast envelope.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0050",
"definition": "The envelope of a chloroplast comprises the inner and outer chloroplast membrane including the intermembrane space. ",
"synonyms": "Chloroplastic envelope.; ",
"content": "Plastid, chloroplast envelope.",
"is_a": "Plastid envelope.; ",
"part_of": "Chloroplast.; ",
"keyword": null,
"gene_ontology": "GO:0009941; chloroplast envelope; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast inner membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0051",
"definition": "The inner membrane of a chloroplast is the membrane which separates the chloroplast stroma from the intermembrane space. ",
"synonyms": "Chloroplastic inner membrane.; ",
"content": "Plastid, chloroplast inner membrane.",
"is_a": "Chloroplast membrane.; Plastid inner membrane.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0009706; chloroplast inner membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast intermembrane space.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0052",
"definition": "The intermembrane space between the inner and the outer chloroplast membranes. ",
"synonyms": "Chloroplastic intermembrane space.; ",
"content": "Plastid, chloroplast intermembrane space.",
"is_a": "Plastid intermembrane space.; ",
"part_of": "Chloroplast envelope.; ",
"keyword": null,
"gene_ontology": "GO:0031972; chloroplast intermembrane space; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0053",
"definition": "The membrane surrounding a chloroplast. Also used when it is not clear in which chloroplast membrane (outer membrane, inner membrane or thylakoid) a protein is found. ",
"synonyms": "Chloroplastic membrane.; ",
"content": "Plastid, chloroplast membrane.",
"is_a": "Plastid membrane.; ",
"part_of": "Chloroplast envelope.; ",
"keyword": null,
"gene_ontology": "GO:0031969; chloroplast membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast outer membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0054",
"definition": "The outer membrane of a chloroplast is the chloroplast membrane facing the cytoplasm. ",
"synonyms": "Chloroplastic outer membrane.; ",
"content": "Plastid, chloroplast outer membrane.",
"is_a": "Chloroplast membrane.; Plastid outer membrane.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0009707; chloroplast outer membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast stroma.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0055",
"definition": "The internal space enclosed by the chloroplast double membrane but excluding the thylakoid space. This space, filled with a colorless hydrophilic matrix, contains DNA, ribosomes and some temporary products of photosynthesis. ",
"synonyms": "Chloroplastic stroma.; ",
"content": "Plastid, chloroplast stroma.",
"is_a": "Plastid stroma.; ",
"part_of": "Chloroplast.; ",
"keyword": null,
"gene_ontology": "GO:0009570; chloroplast stroma; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast thylakoid.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0056",
"definition": "The thylakoid of a chloroplast is an internal system of interconnected membranes, that carry out the light reactions of photosynthesis. They are arranged into stacked and unstacked regions called grana and stroma thylakoids, respectively, that are differentially enriched in photosystem I and II complexes. Although extensive, the thylakoid network in an individual chloroplast is thought to comprise a single lumenal compartment. ",
"synonyms": null,
"content": "Plastid, chloroplast thylakoid.",
"is_a": "Plastid thylakoid.; ",
"part_of": "Chloroplast.; ",
"keyword": null,
"gene_ontology": "GO:0009534; chloroplast thylakoid; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast thylakoid lumen.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0057",
"definition": "The chloroplast thylakoid lumen is the chloroplast compartment bounded by the thylakoid membranes. ",
"synonyms": null,
"content": "Plastid, chloroplast thylakoid lumen.",
"is_a": "Plastid thylakoid lumen.; ",
"part_of": "Chloroplast thylakoid.; ",
"keyword": null,
"gene_ontology": "GO:0009543; chloroplast thylakoid lumen; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chloroplast thylakoid membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0058",
"definition": "The thylakoid membranes of a chloroplast is an internal system of interconnected membranes, that carry out the light reactions of photosynthesis. They are arranged into stacked and unstacked regions called grana and stroma thylakoids, respectively, that are differentially enriched in photosystem I and II complexes. Although extensive, the thylakoid network in an individual chloroplast is thought to comprise a single lumenal compartment. ",
"synonyms": null,
"content": "Plastid, chloroplast thylakoid membrane.",
"is_a": "Plastid thylakoid membrane.; ",
"part_of": "Chloroplast thylakoid.; ",
"keyword": null,
"gene_ontology": "GO:0009535; chloroplast thylakoid membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chlorosome.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0059",
"definition": "The chlorosome is a photosynthetic light-harvesting complex found in anoxygenic green bacteria. Chlorosomes are flattened ellipsoidal organelles appressed to the cytoplasmic face of the cell membrane. They typically contain highly aggregated bacteriochlorophyll c, d, or e (Bchl), a small amount of Bchl a, carotenoids, quinones, and occasionally wax esters. The chlorosome envelope of green sulfur bacteria is an asymmetric membrane containing galactolipids with the galactosyl moieties exposed on the outer surface. The farnesyl tails of the BChl molecules within the chlorosome probably comprise the inner leaflet of this membrane. ",
"synonyms": null,
"content": "Chlorosome.",
"is_a": null,
"part_of": null,
"keyword": "KW-0151",
"gene_ontology": "GO:0046858; chlorosome; ",
"annotation": null,
"references": "PubMed=16866355; DOI=10.1021/bi060776y;; ",
"links": null
},
{
"location_identifier": "Chlorosome envelope.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0060",
"definition": "The chlorosome envelope of green sulfur bacteria is an asymmetric membrane containing galactolipids with the galactosyl moieties exposed on the outer surface. The farnesyl tails of the BChl c molecules within the chlorosome probably comprise the inner leaflet of this membrane. ",
"synonyms": "Chlorosomal envelope.; ",
"content": "Chlorosome, chlorosome envelope.",
"is_a": null,
"part_of": "Chlorosome.; ",
"keyword": null,
"gene_ontology": "GO:0033105; chlorosome envelope; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chromaffin granule.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0061",
"definition": "A chromaffin granule is a specialized secretory vesicle characteristic of chromaffin cells. ",
"synonyms": null,
"content": "Cytoplasmic vesicle, secretory vesicle, chromaffin granule.",
"is_a": "Secretory vesicle.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0042583; chromaffin granule; ",
"annotation": null,
"references": null,
"links": null
}
]
}