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{
"count": 543,
"next": "https://cinder.proteo.info/api/subcellular_locations/?format=api&limit=20&offset=460",
"previous": "https://cinder.proteo.info/api/subcellular_locations/?format=api&limit=20&offset=420",
"results": [
{
"location_identifier": "Thylakoid.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0450",
"definition": "The thylakoid is a membranous cellular structure containing the photosynthetic pigments, reaction centers and electron-transport chain. In chloroplast, thylakoids stack up to form the grana or stay as single cisternae and interconnect the grana. Thylakoid, where photosynthesis occurs, are found in chloroplasts, cyanelles and in photosynthetic bacteria where they are the extensive invaginations of the plasma membrane. ",
"synonyms": null,
"content": "Thylakoid.",
"is_a": null,
"part_of": null,
"keyword": "KW-0793",
"gene_ontology": "GO:0009579; thylakoid; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Target cell membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0451",
"definition": "The target cell membrane is the selectively permeable membrane which separates the target cell cytoplasm from its surroundings. This term is used to describe a toxin located to the cell membrane of a target cell. ",
"synonyms": "Target cytoplasmic membrane; Target plasmalemma;; Target plasma membrane.; ",
"content": "Target cell membrane.",
"is_a": "Target membrane.; ",
"part_of": null,
"keyword": "KW-1052",
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Target membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0452",
"definition": "A target membrane is a lipid bilayer which surrounds target cell enclosed spaces and compartments. This selectively permeable structure is essential for effective separation of a target cell or target cell organelle from its surroundings. This term is used to describe a toxin located to a membrane of a target cell. ",
"synonyms": null,
"content": "Target cell, Membrane, target membrane.",
"is_a": "Membrane.; Target cell.; ",
"part_of": null,
"keyword": "KW-1053",
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Host multivesicular body.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0453",
"definition": "The host multivesicular bodies are a type of late endosome containing internal vesicles formed following the inward budding of the host outer endosomal membrane. The contents of the MVBs are then released into the lysosome lumen. The proteins found in the limiting membrane of MVBs are recycled to other compartments. ",
"synonyms": "Host corpuscula multivesicularis; Host ECV;; Host endosomal carrier vesicle; Host multivesicular bodies; Host MVB.; ",
"content": "Host endosome, host multivesicular body.",
"is_a": null,
"part_of": "Host endosome.; ",
"keyword": null,
"gene_ontology": "GO:0072494; host multivesicular body; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Barrier septum.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0454",
"definition": "The barrier septum, is a septum which spans a cell and does not allow exchange of organelles or cytoplasm between compartments. ",
"synonyms": null,
"content": "Barrier septum.",
"is_a": "Cell septum.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0000935; division septum; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Cell septum.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0455",
"definition": "A structure composed of peptidoglycan and often chitin in addition to other materials. It usually forms perpendicular to the long axis of a cell or hypha and grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization of a cell into two daughter cells. ",
"synonyms": null,
"content": "Cell septum.",
"is_a": null,
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0030428; cell septum; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Cell tip.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0456",
"definition": "The region at either end of the longest axis of a cylindrical or elongated cell, where polarized growth may occur. ",
"synonyms": null,
"content": "Cell tip.",
"is_a": null,
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0051286; cell tip; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Photoreceptor inner segment.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0457",
"definition": "The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs. ",
"synonyms": null,
"content": "Photoreceptor inner segment.",
"is_a": null,
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0001917; photoreceptor inner segment; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Photoreceptor outer segment.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0458",
"definition": "The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes. ",
"synonyms": null,
"content": "Cell projection, cilium, photoreceptor outer segment.",
"is_a": "Cilium.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0001750; photoreceptor outer segment; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Host basolateral cell membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0459",
"definition": "The fraction of the host cell membrane at the basolateral side of the cell, which faces adjacent host cells and the underlying host connective tissue. ",
"synonyms": "Host basolateral plasma membrane.; ",
"content": "Host basolateral cell membrane.",
"is_a": null,
"part_of": "Host cell membrane.; ",
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Kinocilium.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0460",
"definition": "The kinocilium is an immotile primary cilium that is found at the apical surface of auditory receptor cells. Hair bundles, the mechanosensory device of the sensory hair cells, are composed of height-ranked rows of stereocilia and a single kinocilium that are interconnected by extracellular proteinaceous links. ",
"synonyms": "Kinocilia.; ",
"content": "Cell projection, kinocilium.",
"is_a": "Cilium.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0060091; kinocilium; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Host early endosome.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0461",
"definition": "The host early endosomes form a tubulovesicular network spread throughout the cortical cytoplasm of the host cell. Host early endosomes are the primary sorting station in the endocytic pathway from which endocytosed molecules can be recycled back to the host cell membrane or targeted to degradation in the host lysosomes. ",
"synonyms": null,
"content": "Host early endosome.",
"is_a": null,
"part_of": "Host endosome.; ",
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Host early endosome membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0462",
"definition": "The membrane surrounding the host early endosomes, which form a tubulovesicular network spread throughout the cortical cytoplasm of the host cell. ",
"synonyms": "Host early endosomal membrane.; ",
"content": "Host early endosome membrane.",
"is_a": "Host endosome membrane.; ",
"part_of": "Host early endosome.; ",
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Host trans-Golgi network.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0463",
"definition": "The host trans-Golgi network is a highly dynamic series of interconnected tubules and vesicles at the trans face of the host Golgi stack. The host trans-Golgi network functions in the processing and sorting of glycoproteins and glycolipids at the interface of the biosynthetic and endosomal pathways. The generation and maintenance of host apical and basolateral membranes rely on sorting events that occur in the host TGN. ",
"synonyms": "Host Golgi trans-face; Host TGN; Host trans-Golgi;; Host trans-Golgi complex.; ",
"content": "Host Golgi apparatus, host trans-Golgi network.",
"is_a": null,
"part_of": "Host Golgi apparatus.; ",
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Host trans-Golgi network membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0464",
"definition": "The membrane surrounding the host trans-Golgi network. ",
"synonyms": "Host Golgi trans-face membrane; Host TGN membrane;; Host trans-Golgi complex membrane; Host trans-Golgi membrane.; ",
"content": "Host Golgi apparatus, host trans-Golgi network membrane.",
"is_a": "Host Golgi apparatus membrane.; ",
"part_of": "Host trans-Golgi network.; ",
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "PML body.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0465",
"definition": "The PML bodies are dynamic nuclear protein aggregates interspersed between chromatin. These punctate nuclear structures are call PML bodies because the PML gene is essential for their formation. These discrete nuclear foci, 0.2-1.0 micrometer wide, are present in most mammalian cell nuclei and typically number 1 to 30 bodies per nucleus, depending on the cell type, cell-cycle phase and differentiation stage. Recent evidence implies that, although they appear to be uniform, PML-NBs are structurally and functionally heterogeneous and are dynamic structures. ",
"synonyms": "Kremer body; ND10; Nuclear domains-10; PML-NB; PML-nuclear body;; PML oncogenic domain; Promyelocytic leukaemia nuclear body;; Promyelocytic leukemia nuclear body.; ",
"content": "Nucleus, PML body.",
"is_a": "Nuclear body.; ",
"part_of": "Nucleus.; ",
"keyword": null,
"gene_ontology": "GO:0016605; PML body; ",
"annotation": null,
"references": "PubMed=17928811; DOI=10.1038/nrm2277;; ",
"links": null
},
{
"location_identifier": "Extracellular exosome.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0466",
"definition": "Exosomes are 30-120 nm microvesicles of endocytic origin secreted by most cell types and found in abundance in body fluids, including blood, saliva, urine, and breast milk. They contain various molecular constituents of their cell of origin, including proteins and nucleic acids, and carry this cargo between diverse locations in the body. These microvesicles form by budding into the lumen of the multivesicular bodies (MVBs) and are released to extracellular fluids by fusion of MVBs with the plasma membrane. ",
"synonyms": "Extracellular vesicular exosome.; ",
"content": "Secreted, extracellular exosome.",
"is_a": null,
"part_of": "Secreted.; ",
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": "http://exocarta.ludwig.edu.au/; "
},
{
"location_identifier": "Cleavage furrow.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0467",
"definition": "In fungal, amoeboid and animal cells, during the cytokinesis at the end of cell division, a cleavage furrow forms in the plasma membrane. A contractile ring containing actin and myosin is assembled at the selected site of the future cleavage furrow. Ring contraction produces the force to constrict the cleavage furrow and the daughter cells separate by membrane fusion. ",
"synonyms": null,
"content": "Cleavage furrow.",
"is_a": null,
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0032154; cleavage furrow; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Chromosome.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0468",
"definition": "An organized structure composed of a single very long molecule of coiled DNA and associated proteins (e.g. histones) that carries hereditary information. ",
"synonyms": "Chromoplastic stroma.; ",
"content": "Chromosome.",
"is_a": null,
"part_of": null,
"keyword": "KW-0158",
"gene_ontology": "GO:0005694; chromosome; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Midbody.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0469",
"definition": "The midbody is the central region of the thin intercellular cytoplasmic bridge formed between daughter cells during cytokinesis. It consists of tightly bundled antiparallel microtubules, which embrace a phase-dense circular structure, called midbody ring. At the final stage of cytokinesis, the intercellular bridge is cleaved, in a process termed abscission, and two daughter cells are formed. Following abscission, the residual midbody structure, known as the midbody remnant or midbody derivative, can have different fates depending on the cell type. It can be either released to the extracellular medium, degraded by autophagy or persists in the cytoplasm, showing asymmetric accumulation in the daughter cells. ",
"synonyms": "Midbody derivative; Midbody remnant.; ",
"content": "Midbody.",
"is_a": null,
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0030496; midbody; ",
"annotation": "Some authors consider that Flemming body and Midbody are synonyms. This is not the case in UniProtKB, where we use Flemming body as a synonym for Midbody ring, a specific part of the midbody. If you have doubt, use the broader term, Midbody. ",
"references": null,
"links": null
}
]
}