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{
"count": 543,
"next": "https://cinder.proteo.info/api/subcellular_locations/?format=api&limit=20&offset=100&ordering=-location_identifier",
"previous": "https://cinder.proteo.info/api/subcellular_locations/?format=api&limit=20&offset=60&ordering=-location_identifier",
"results": [
{
"location_identifier": "Recycling endosome membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0231",
"definition": "The membrane surrounding the recycling endosomes. ",
"synonyms": "Recycling endosomal membrane.; ",
"content": "Recycling endosome membrane.",
"is_a": "Endosome membrane.; ",
"part_of": "Recycling endosome.; ",
"keyword": null,
"gene_ontology": "GO:0055038; recycling endosome membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Recycling endosome lumen.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0345",
"definition": "The recycling endosomal compartment bounded by the membrane of the recycling endosome. ",
"synonyms": "Recycling endosomal lumen.; ",
"content": "Recycling endosome lumen.",
"is_a": "Endosome lumen.; ",
"part_of": "Recycling endosome.; ",
"keyword": null,
"gene_ontology": "GO:0034777; recycling endosome lumen; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Recycling endosome.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0232",
"definition": "The recycling endosome is a membrane network composed of narrow diameters tubules which concentrate in the vicinity of the microtubule organizing center. Recycling receptors after release of their ligands accumulate in those membranes which are devoid of fluid markers. Recycling endosomes may be an intermediate station for receptors before recycling back to the cell surface. ",
"synonyms": "Endosomal recycling compartment; ERC.; ",
"content": "Recycling endosome.",
"is_a": null,
"part_of": "Endosome.; ",
"keyword": null,
"gene_ontology": "GO:0055037; recycling endosome; ",
"annotation": "Compartment specific marker: Rab11. ",
"references": null,
"links": null
},
{
"location_identifier": "Pseudopodium tip.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0471",
"definition": "The end of the pseudopodium distal to the body of the cell. ",
"synonyms": null,
"content": "Cell projection, pseudopodium tip.",
"is_a": null,
"part_of": "Pseudopodium.; ",
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Pseudopodium membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0299",
"definition": "The portion of the cell membrane surrounding a pseudopodium. ",
"synonyms": null,
"content": "Cell projection, pseudopodium membrane.",
"is_a": null,
"part_of": "Cell membrane.; Pseudopodium.; ",
"keyword": null,
"gene_ontology": "GO:0031260; pseudopodium membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Pseudopodium.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0298",
"definition": "The pseudopodium is a thick knobby cell protrusion. Pseudopodia are produced by polymerization of extensive dendritic meshwork of actin filaments along broad sectors of the cell surface. These temporary irregular and dynamic protrusion or retractile processes of a cell, are associated with ameboid movement (crawling). Pseudopodium, or \"false foot\", mostly used for motile protozoans is comparable to the 'lamellipodium' in vertebrate cells. ",
"synonyms": "Pseudopod; Pseudopodia.; ",
"content": "Cell projection, pseudopodium.",
"is_a": "Cell projection.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0031143; pseudopodium; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Protoplasm.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0229",
"definition": "The protoplasm is the viscid, translucent, polyphasic colloid with water as the continuous phase that makes up the essential material of all plant and animal cells. It is composed mainly of nucleic acids, proteins, lipids, carbohydrates, and inorganic salts. The protoplasm surrounding the nucleus is known as the cytoplasm and that composing the nucleus is the nucleoplasm. ",
"synonyms": null,
"content": "Protoplasm.",
"is_a": null,
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0005622; intracellular anatomical structure; ",
"annotation": "Not used. ",
"references": null,
"links": null
},
{
"location_identifier": "Protein storage vacuole membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0227",
"definition": "The membrane surrounding a protein storage vacuole. ",
"synonyms": "Protein storage vacuolar membrane.; ",
"content": "Protein storage vacuole membrane.",
"is_a": "Vacuole membrane.; ",
"part_of": "Protein storage vacuole.; ",
"keyword": null,
"gene_ontology": "GO:0032586; protein storage vacuole membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Protein storage vacuole lumen.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0344",
"definition": "The protein storage vacuolar compartment bounded by the membrane of the protein storage vacuole. ",
"synonyms": "Protein storage vacuolar lumen.; ",
"content": "Protein storage vacuole lumen.",
"is_a": "Vacuole lumen.; ",
"part_of": "Protein storage vacuole.; ",
"keyword": null,
"gene_ontology": "GO:0034495; protein storage vacuole lumen; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Protein storage vacuole.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0228",
"definition": "The protein storage vacuole (PSV) is a specialized vacuole where storage proteins accumulate. These act as a source of amino acids for various SYnthetic activities. ",
"synonyms": "PSV; Storage vacuole.; ",
"content": "Protein storage vacuole.",
"is_a": "Vacuole.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0000326; protein storage vacuole; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Prospore membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0368",
"definition": "The prospore membrane is a double membrane which forms at the spindle pole body outer plaque during the second meiotic division of the sporulation process. The prospore membrane grows larger and finally engulfs the post-meiotic nuclei to form immature spores called prospores. The de novo synthesis of the spore wall occurs in the prospore intermembrane space and leads to mature spores. ",
"synonyms": "Prespore membrane.; ",
"content": "Prospore membrane.",
"is_a": "Membrane.; ",
"part_of": "Prospore.; ",
"keyword": null,
"gene_ontology": "GO:0005628; prospore membrane; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Prospore.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0369",
"definition": "The prospore or immature spore is formed during sporulation by the engulfment of the post-meiotic nuclei by the prospore double membrane. These prospores are then maturated into spores with the synthesis of the spore wall. ",
"synonyms": "Prespore.; ",
"content": "Prospore.",
"is_a": null,
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0042764; ascospore-type prospore; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Prolamellar body.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0226",
"definition": "The prolamellar body is a paracrystalline lattice found in the plastids of etiolated plants (etioplasts). Upon greening it gives rise to thylakoids. ",
"synonyms": "Etioplast prolamellar body.; ",
"content": "Plastid, etioplast, prolamellar body.",
"is_a": null,
"part_of": "Etioplast.; ",
"keyword": null,
"gene_ontology": "GO:0009541; etioplast prolamellar body; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Primary cell wall.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0225",
"definition": "Trimary cell wall is the first-formed wall layer of still growing plant cells (at least potentially). This wall is part of the apoplast which itself is largely self-contiguous and contains everything that is located between the plasma membrane and the cuticle. Primary walls are composed predominantly of polysaccharides, smaller proportions of glycoproteins and, in some specialized cell types, various noncarbohydrate substances such as lignin, suberin, cutin, cutan or silica. It is strong but usually thin, flexible, and capable of both plastic and elastic extension. It governs the rate and direction of cell expansion, and thus the ultimate size and shape of the cell. ",
"synonyms": null,
"content": "Secreted, primary cell wall.",
"is_a": "Cell wall.; ",
"part_of": null,
"keyword": null,
"gene_ontology": "GO:0009530; primary cell wall; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Prevacuolar compartment membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0224",
"definition": "The membrane surrounding the prevacuolar compartment. ",
"synonyms": "PVC membrane.; ",
"content": "Prevacuolar compartment membrane.",
"is_a": "Membrane.; ",
"part_of": "Endomembrane system.; Prevacuolar compartment.; ",
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Prevacuolar compartment lumen.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0343",
"definition": "The PVC compartment bounded by the membrane of the PVC. ",
"synonyms": "PVC lumen.; ",
"content": "Prevacuolar compartment lumen.",
"is_a": null,
"part_of": "Prevacuolar compartment.; ",
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Prevacuolar compartment.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0223",
"definition": "The prevacuolar compartment is an endocytic multivesiculate compartment involved in Golgi-vacuole trafficking. ",
"synonyms": "PVC.; ",
"content": "Prevacuolar compartment.",
"is_a": null,
"part_of": null,
"keyword": null,
"gene_ontology": null,
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Presynaptic endosome.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0525",
"definition": "An endosome present in the presynapse that fuses with endocytic vesicles arising in the presynaptic endocytic zone. Presynaptic endosomes are involved on synaptic vesicle regeneration in GABAergic synapses at least, even if different modes of synaptic vesicles recycling exist depending on the type of synapse. ",
"synonyms": null,
"content": "Presynaptic endosome.",
"is_a": "Endosome.; ",
"part_of": "Presynapse.; ",
"keyword": null,
"gene_ontology": "GO:0098830; presynaptic endosome; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Presynaptic endocytic zone.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0529",
"definition": "Region of the presynaptic membrane and underlying cytoplasm that surrounds the active zone and where synaptic vesicles are endocytosed and recycled following release. ",
"synonyms": "Periactive zone; Peri-active zone.; ",
"content": "Presynaptic endocytic zone.",
"is_a": null,
"part_of": "Presynapse.; ",
"keyword": null,
"gene_ontology": "GO:0098833; presynaptic endocytic zone; ",
"annotation": null,
"references": null,
"links": null
},
{
"location_identifier": "Presynaptic cell membrane.",
"topology_identifier": null,
"orientation_identifier": null,
"accession": "SL-0222",
"definition": "In a chemical synapse, the presynaptic membrane is the cell membrane of an axon terminal that faces the receiving cell. The postsynaptic membrane is separated from the presynaptic membrane by the synaptic cleft. ",
"synonyms": "Presynaptic membrane.; ",
"content": "Presynaptic cell membrane.",
"is_a": "Synaptic cell membrane.; ",
"part_of": "Presynapse.; ",
"keyword": null,
"gene_ontology": "GO:0042734; presynaptic membrane; ",
"annotation": null,
"references": null,
"links": null
}
]
}